RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 ALOX12P18054 663 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 RPL21P46778 160 aaKnown RBP14.91□□□□□ -0.02
VRK3-221ENST00000600284 SCTRP47872 440 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 RGS1Q08116 209 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 CALCOCO2Q13137 446 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 FASTKD3Q14CZ7 662 aaKnown RBP14.91□□□□□ -0.02
VRK3-221ENST00000600284 EXT1Q16394 746 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 C4orf17Q53FE4 359 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 CATSPEREQ5SY80 951 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 ABHD17BQ5VST6 288 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 H3F3CQ6NXT2 135 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 CYS1Q717R9 158 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 ABHD13Q7L211 337 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 MAATS1Q7Z4T9 603 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 ANKRD37Q7Z713 158 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 THOC6Q86W42 341 aaKnown RBP14.91□□□□□ -0.02
VRK3-221ENST00000600284 ZBED8Q8IZ13 594 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 ZNF740Q8NDX6 193 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 TRPV3Q8NET8 790 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 M1APQ8TC57 530 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 SLX1AQ9BQ83 275 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 RHOJQ9H4E5 214 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 PLA2G3Q9NZ20 509 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 STMN3Q9NZ72 180 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 WHRNQ9P202 907 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 IKZF3Q9UKT9 509 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 PYCARDQ9ULZ3 195 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 DYRK1BQ9Y463 629 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 OARD1Q9Y530 152 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 NAV2Q8IVL1 2488 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 ICE1Q9Y2F5 2266 aa14.9□□□□□ -0.02
VRK3-221ENST00000600284 HIVEP3Q5T1R4 2406 aa14.9□□□□□ -0.02
VRK3-221ENST00000600284 MAGEB17A8MXT2 336 aa14.9□□□□□ -0.02
VRK3-221ENST00000600284 E2F3O00716 465 aa14.9□□□□□ -0.02
VRK3-221ENST00000600284 SEC24DO94855 1032 aaPredicted RBP14.9□□□□□ -0.02
VRK3-221ENST00000600284 WDPCPO95876 746 aa14.9□□□□□ -0.02
VRK3-221ENST00000600284 CELA2AP08217 269 aa14.9□□□□□ -0.02
VRK3-221ENST00000600284 RNF224P0DH78 156 aa14.9□□□□□ -0.02
VRK3-221ENST00000600284 SAT1P21673 171 aa14.9□□□□□ -0.02
VRK3-221ENST00000600284 TAS2R39P59534 338 aa14.9□□□□□ -0.02
VRK3-221ENST00000600284 REEP5Q00765 189 aa14.9□□□□□ -0.02
VRK3-221ENST00000600284 POU4F1Q01851 419 aa14.9□□□□□ -0.02
VRK3-221ENST00000600284 MEF2AQ02078 507 aaPredicted RBP14.9□□□□□ -0.02
VRK3-221ENST00000600284 NSDHLQ15738 373 aa14.9□□□□□ -0.02
VRK3-221ENST00000600284 BTBD16Q32M84 506 aa14.9□□□□□ -0.02
VRK3-221ENST00000600284 ZNF324BQ6AW86 544 aaPredicted RBP14.9□□□□□ -0.02
VRK3-221ENST00000600284 NXPE4Q6UWF7 544 aa14.9□□□□□ -0.02
VRK3-221ENST00000600284 LANCL3Q6ZV70 420 aa14.9□□□□□ -0.02
VRK3-221ENST00000600284 ADAMTSL2Q86TH1 951 aa14.9□□□□□ -0.02
VRK3-221ENST00000600284 SUN3Q8TAQ9 357 aa14.9□□□□□ -0.02
VRK3-221ENST00000600284 PYROXD1Q8WU10 500 aa14.9□□□□□ -0.02
VRK3-221ENST00000600284 MOCOSQ96EN8 888 aa14.9□□□□□ -0.02
VRK3-221ENST00000600284 ZNF354BQ96LW1 612 aa14.9□□□□□ -0.02
VRK3-221ENST00000600284 AIF1LQ9BQI0 150 aa14.9□□□□□ -0.02
VRK3-221ENST00000600284 ERP44Q9BS26 406 aa14.9□□□□□ -0.02
VRK3-221ENST00000600284 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.9□□□□□ -0.02
VRK3-221ENST00000600284 OLAHQ9NV23 265 aa14.9□□□□□ -0.02
VRK3-221ENST00000600284 CTNNAL1Q9UBT7 734 aa14.9□□□□□ -0.02
VRK3-221ENST00000600284 SLC22A14Q9Y267 594 aa14.9□□□□□ -0.02
VRK3-221ENST00000600284 SPTAN1Q13813 2472 aaKnown RBP14.9□□□□□ -0.02
VRK3-221ENST00000600284 SPTBN1Q01082 2364 aaKnown RBP14.9□□□□□ -0.02
VRK3-221ENST00000600284 POLEQ07864 2286 aa14.9□□□□□ -0.02
VRK3-221ENST00000600284 NBPF19A0A087WUL8 3843 aa14.89□□□□□ -0.03
VRK3-221ENST00000600284 OR5H15A6NDH6 313 aa14.89□□□□□ -0.03
VRK3-221ENST00000600284 CDC7O00311 574 aa14.89□□□□□ -0.03
VRK3-221ENST00000600284 CDK2AP1O14519 115 aa14.89□□□□□ -0.03
VRK3-221ENST00000600284 FANCGO15287 622 aa14.89□□□□□ -0.03
VRK3-221ENST00000600284 FHP07954 510 aa14.89□□□□□ -0.03
VRK3-221ENST00000600284 JAK1P23458 1154 aa14.89□□□□□ -0.03
VRK3-221ENST00000600284 SLC12A2P55011 1212 aa14.89□□□□□ -0.03
VRK3-221ENST00000600284 RHAGQ02094 409 aa14.89□□□□□ -0.03
VRK3-221ENST00000600284 KLHDC8AQ8IYD2 350 aa14.89□□□□□ -0.03
VRK3-221ENST00000600284 SPATA4Q8NEY3 305 aa14.89□□□□□ -0.03
VRK3-221ENST00000600284 DNAJB8Q8NHS0 232 aa14.89□□□□□ -0.03
VRK3-221ENST00000600284 CDKL2Q92772 493 aa14.89□□□□□ -0.03
VRK3-221ENST00000600284 TBC1D20Q96BZ9 403 aa14.89□□□□□ -0.03
VRK3-221ENST00000600284 PEX11GQ96HA9 241 aa14.89□□□□□ -0.03
VRK3-221ENST00000600284 LPAR4Q99677 370 aa14.89□□□□□ -0.03
VRK3-221ENST00000600284 EGFL8Q99944 293 aa14.89□□□□□ -0.03
VRK3-221ENST00000600284 SLC6A16Q9GZN6 736 aa14.89□□□□□ -0.03
VRK3-221ENST00000600284 GPAMQ9HCL2 828 aa14.89□□□□□ -0.03
VRK3-221ENST00000600284 MMP25Q9NPA2 562 aa14.89□□□□□ -0.03
VRK3-221ENST00000600284 LANCL2Q9NS86 450 aa14.89□□□□□ -0.03
VRK3-221ENST00000600284 PCDHGB6Q9Y5F9 930 aa14.89□□□□□ -0.03
VRK3-221ENST00000600284 IGHV3-20A0A0C4DH32 117 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 NPEPPSL1A6NEC2 478 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 CHST10O43529 356 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 PRAMEF2O60811 474 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 SERPIND1P05546 499 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 SERPINA6P08185 405 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 GSTA2P09210 222 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 SMIM10L1P0DMW3 83 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 GNAZP19086 355 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 ZNF33BQ06732 778 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 ACTN3Q08043 901 aaPredicted RBP14.88□□□□□ -0.03
VRK3-221ENST00000600284 ZNF460Q14592 562 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 ABRAXAS2Q15018 415 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 DEFB134Q4QY38 66 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 SFT2D3Q587I9 215 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 CDKL4Q5MAI5 379 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms