RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 ZNF763Q0D2J5 394 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 GK3PQ14409 553 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 UBXN2BQ14CS0 331 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 ENPP6Q6UWR7 440 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 ZBTB49Q6ZSB9 765 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 ZNF621Q6ZSS3 439 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 CAMKMTQ7Z624 323 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 OR1E3Q8WZA6 343 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 COQ8BQ96D53 544 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 CENPNQ96H22 339 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 BMFQ96LC9 184 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 NELL2Q99435 816 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 TBC1D17Q9HA65 648 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 ADGRE2Q9UHX3 823 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 AP3M1Q9Y2T2 418 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 SMNDC1O75940 238 aaKnown RBP eCLIP16.33■□□□□ 0.21
SHKBP1-216ENST00000598201 KLK1P06870 262 aa16.33■□□□□ 0.21
SHKBP1-216ENST00000598201 ENGP17813 658 aa16.33■□□□□ 0.21
SHKBP1-216ENST00000598201 HPCAL1P37235 193 aa16.33■□□□□ 0.21
SHKBP1-216ENST00000598201 NKG7Q16617 165 aa16.33■□□□□ 0.21
SHKBP1-216ENST00000598201 UAP1L1Q3KQV9 507 aa16.33■□□□□ 0.21
SHKBP1-216ENST00000598201 EOGTQ5NDL2 527 aa16.33■□□□□ 0.21
SHKBP1-216ENST00000598201 PPP4R4Q6NUP7 873 aa16.33■□□□□ 0.21
SHKBP1-216ENST00000598201 MARVELD2Q8N4S9 558 aa16.33■□□□□ 0.21
SHKBP1-216ENST00000598201 TNIP2Q8NFZ5 429 aa16.33■□□□□ 0.21
SHKBP1-216ENST00000598201 FBXO30Q8TB52 745 aa16.33■□□□□ 0.21
SHKBP1-216ENST00000598201 C16orf78Q8WTQ4 265 aa16.33■□□□□ 0.21
SHKBP1-216ENST00000598201 STARD8Q92502 1023 aa16.33■□□□□ 0.21
SHKBP1-216ENST00000598201 COL25A1Q9BXS0 654 aaPredicted RBP16.33■□□□□ 0.21
SHKBP1-216ENST00000598201 LTB4R2Q9NPC1 389 aa16.33■□□□□ 0.21
SHKBP1-216ENST00000598201 PNMA8BQ9ULN7 279 aaPredicted RBP16.33■□□□□ 0.21
SHKBP1-216ENST00000598201 MMP17Q9ULZ9 603 aa16.33■□□□□ 0.21
SHKBP1-216ENST00000598201 A6NHS1 94 aa16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 FAM170BA6NMN3 283 aa16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 H0YJX3 145 aa16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 CLIC1O00299 241 aa16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 GMNNO75496 209 aa16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 EML2O95834 649 aa16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 FCGR1AP12314 374 aa16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 PTX3P26022 381 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 RAB28P51157 221 aa16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 CCR8P51685 355 aa16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 KIAA1024LP59773 190 aa16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 REEP5Q00765 189 aa16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 ATP6AP1Q15904 470 aa16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 RPE65Q16518 533 aa16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 UGT2A3Q6UWM9 527 aa16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 ENPP7Q6UWV6 458 aa16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 CBR4Q8N4T8 237 aa16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 FLCNQ8NFG4 579 aa16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 OR4K1Q8NGD4 311 aa16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 OR52E1Q8NGJ3 308 aa16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 NETO1Q8TDF5 533 aa16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 AIF1LQ9BQI0 150 aa16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 FOXQ1Q9C009 403 aa16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 PCBD2Q9H0N5 130 aa16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 RHBGQ9H310 441 aa16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 SH3BP4Q9P0V3 963 aa16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 EBF1Q9UH73 591 aa16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 ATP6V1HQ9UI12 483 aa16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 OAZ3Q9UMX2 235 aa16.33■□□□□ 0.2
SHKBP1-216ENST00000598201 IGKV1-8A0A0C4DH67 115 aa16.32■□□□□ 0.2
SHKBP1-216ENST00000598201 DPPA5A6NC42 116 aa16.32■□□□□ 0.2
SHKBP1-216ENST00000598201 TNFRSF10AO00220 468 aa16.32■□□□□ 0.2
SHKBP1-216ENST00000598201 ACOX3O15254 700 aa16.32■□□□□ 0.2
SHKBP1-216ENST00000598201 KCNJ13O60928 360 aa16.32■□□□□ 0.2
SHKBP1-216ENST00000598201 SCELO95171 688 aa16.32■□□□□ 0.2
SHKBP1-216ENST00000598201 PKLRP30613 574 aa16.32■□□□□ 0.2
SHKBP1-216ENST00000598201 HSPA13P48723 471 aa16.32■□□□□ 0.2
SHKBP1-216ENST00000598201 PHEXP78562 749 aa16.32■□□□□ 0.2
SHKBP1-216ENST00000598201 ABHD18Q0P651 414 aa16.32■□□□□ 0.2
SHKBP1-216ENST00000598201 GPR155Q7Z3F1 870 aa16.32■□□□□ 0.2
SHKBP1-216ENST00000598201 SLC9B2Q86UD5 537 aa16.32■□□□□ 0.2
SHKBP1-216ENST00000598201 TRIM69Q86WT6 500 aa16.32■□□□□ 0.2
SHKBP1-216ENST00000598201 FAM20CQ8IXL6 584 aa16.32■□□□□ 0.2
SHKBP1-216ENST00000598201 ZNF687Q8N1G0 1237 aa16.32■□□□□ 0.2
SHKBP1-216ENST00000598201 CLEC4FQ8N1N0 589 aa16.32■□□□□ 0.2
SHKBP1-216ENST00000598201 OR2A1Q8NGT9 310 aa16.32■□□□□ 0.2
SHKBP1-216ENST00000598201 HMGB4Q8WW32 186 aa16.32■□□□□ 0.2
SHKBP1-216ENST00000598201 REXO5Q96IC2 774 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-216ENST00000598201 CNBD2Q96M20 576 aa16.32■□□□□ 0.2
SHKBP1-216ENST00000598201 OR2M4Q96R27 311 aa16.32■□□□□ 0.2
SHKBP1-216ENST00000598201 REEP4Q9H6H4 257 aa16.32■□□□□ 0.2
SHKBP1-216ENST00000598201 CAAP1Q9H8G2 361 aa16.32■□□□□ 0.2
SHKBP1-216ENST00000598201 SCOCQ9UIL1 159 aa16.32■□□□□ 0.2
SHKBP1-216ENST00000598201 ICKQ9UPZ9 632 aa16.32■□□□□ 0.2
SHKBP1-216ENST00000598201 CREG1O75629 220 aa16.31■□□□□ 0.2
SHKBP1-216ENST00000598201 HOXC4P09017 264 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-216ENST00000598201 CHRNB1P11230 501 aa16.31■□□□□ 0.2
SHKBP1-216ENST00000598201 AK4P27144 223 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-216ENST00000598201 TAS2R50P59544 299 aa16.31■□□□□ 0.2
SHKBP1-216ENST00000598201 KRT33BQ14525 404 aa16.31■□□□□ 0.2
SHKBP1-216ENST00000598201 NFATC4Q14934 902 aa16.31■□□□□ 0.2
SHKBP1-216ENST00000598201 PRSS53Q2L4Q9 553 aa16.31■□□□□ 0.2
SHKBP1-216ENST00000598201 FBXO43Q4G163 708 aa16.31■□□□□ 0.2
SHKBP1-216ENST00000598201 INTS11Q5TA45 600 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-216ENST00000598201 FAM71E1Q6IPT2 247 aa16.31■□□□□ 0.2
SHKBP1-216ENST00000598201 Q6ZS52 159 aa16.31■□□□□ 0.2
SHKBP1-216ENST00000598201 RD3Q7Z3Z2 195 aa16.31■□□□□ 0.2
SHKBP1-216ENST00000598201 PLD3Q8IV08 490 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms