RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 ARGFXA6NJG6 315 aa20.78■□□□□ 0.92
HOMER3-206ENST00000594439 ZGLP1P0C6A0 271 aa20.78■□□□□ 0.92
HOMER3-206ENST00000594439 CASP2P42575 452 aa20.78■□□□□ 0.92
HOMER3-206ENST00000594439 MAT1AQ00266 395 aaKnown RBP20.78■□□□□ 0.92
HOMER3-206ENST00000594439 OCA2Q04671 838 aa20.78■□□□□ 0.92
HOMER3-206ENST00000594439 RGS1Q08116 209 aa20.78■□□□□ 0.92
HOMER3-206ENST00000594439 PCDH1Q08174 1060 aa20.78■□□□□ 0.92
HOMER3-206ENST00000594439 CHIT1Q13231 466 aa20.78■□□□□ 0.92
HOMER3-206ENST00000594439 PCBP2Q15366 365 aaKnown RBP eCLIP20.78■□□□□ 0.92
HOMER3-206ENST00000594439 TBCCQ15814 346 aa20.78■□□□□ 0.92
HOMER3-206ENST00000594439 SYT16Q17RD7 645 aa20.78■□□□□ 0.92
HOMER3-206ENST00000594439 ERCC6LQ2NKX8 1250 aa20.78■□□□□ 0.92
HOMER3-206ENST00000594439 VWA2Q5GFL6 755 aa20.78■□□□□ 0.92
HOMER3-206ENST00000594439 CPZQ66K79 652 aa20.78■□□□□ 0.92
HOMER3-206ENST00000594439 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.78■□□□□ 0.92
HOMER3-206ENST00000594439 CNPY4Q8N129 248 aa20.78■□□□□ 0.92
HOMER3-206ENST00000594439 KRT78Q8N1N4 520 aa20.78■□□□□ 0.92
HOMER3-206ENST00000594439 MIEF2Q96C03 454 aa20.78■□□□□ 0.92
HOMER3-206ENST00000594439 PTCD3Q96EY7 689 aaKnown RBP20.78■□□□□ 0.92
HOMER3-206ENST00000594439 IP6K3Q96PC2 410 aa20.78■□□□□ 0.92
HOMER3-206ENST00000594439 MRPL57Q9BQC6 102 aaKnown RBP20.78■□□□□ 0.92
HOMER3-206ENST00000594439 EFCAB11Q9BUY7 163 aa20.78■□□□□ 0.92
HOMER3-206ENST00000594439 TRIM55Q9BYV6 548 aa20.78■□□□□ 0.92
HOMER3-206ENST00000594439 SLC6A16Q9GZN6 736 aa20.78■□□□□ 0.92
HOMER3-206ENST00000594439 ANKHQ9HCJ1 492 aa20.78■□□□□ 0.92
HOMER3-206ENST00000594439 MKKSQ9NPJ1 570 aaPredicted RBP20.78■□□□□ 0.92
HOMER3-206ENST00000594439 TBK1Q9UHD2 729 aa20.78■□□□□ 0.92
HOMER3-206ENST00000594439 MAP4K5Q9Y4K4 846 aa20.78■□□□□ 0.92
HOMER3-206ENST00000594439 SGK494L7N484 410 aa20.77■□□□□ 0.92
HOMER3-206ENST00000594439 WFS1O76024 890 aa20.77■□□□□ 0.92
HOMER3-206ENST00000594439 PRB1P04280 392 aa20.77■□□□□ 0.92
HOMER3-206ENST00000594439 MMP11P24347 488 aa20.77■□□□□ 0.92
HOMER3-206ENST00000594439 IRF8Q02556 426 aa20.77■□□□□ 0.92
HOMER3-206ENST00000594439 KLC1Q07866 573 aa20.77■□□□□ 0.92
HOMER3-206ENST00000594439 CHAF1BQ13112 559 aa20.77■□□□□ 0.92
HOMER3-206ENST00000594439 KCNAB2Q13303 367 aa20.77■□□□□ 0.92
HOMER3-206ENST00000594439 TDRPQ86YL5 185 aa20.77■□□□□ 0.92
HOMER3-206ENST00000594439 PRSS58Q8IYP2 241 aa20.77■□□□□ 0.92
HOMER3-206ENST00000594439 SHISA5Q8N114 240 aa20.77■□□□□ 0.92
HOMER3-206ENST00000594439 TMEM151AQ8N4L1 468 aa20.77■□□□□ 0.92
HOMER3-206ENST00000594439 TEX9Q8N6V9 391 aa20.77■□□□□ 0.92
HOMER3-206ENST00000594439 PTGR2Q8N8N7 351 aaPredicted RBP20.77■□□□□ 0.92
HOMER3-206ENST00000594439 TTLQ8NG68 377 aa20.77■□□□□ 0.92
HOMER3-206ENST00000594439 UTP15Q8TED0 518 aaKnown RBP20.77■□□□□ 0.92
HOMER3-206ENST00000594439 YIPF2Q9BWQ6 316 aa20.77■□□□□ 0.92
HOMER3-206ENST00000594439 TGIF2Q9GZN2 237 aa20.77■□□□□ 0.92
HOMER3-206ENST00000594439 AICDAQ9GZX7 198 aa20.77■□□□□ 0.92
HOMER3-206ENST00000594439 KLHL31Q9H511 634 aa20.77■□□□□ 0.92
HOMER3-206ENST00000594439 PPCSQ9HAB8 311 aa20.77■□□□□ 0.92
HOMER3-206ENST00000594439 TUBD1Q9UJT1 453 aa20.77■□□□□ 0.92
HOMER3-206ENST00000594439 ZNF490Q9ULM2 529 aaPredicted RBP20.77■□□□□ 0.92
HOMER3-206ENST00000594439 TMCO1Q9UM00 188 aa20.77■□□□□ 0.92
HOMER3-206ENST00000594439 KLHL18O94889 574 aa20.76■□□□□ 0.91
HOMER3-206ENST00000594439 SIX3O95343 332 aaPredicted RBP20.76■□□□□ 0.91
HOMER3-206ENST00000594439 SERPINA6P08185 405 aa20.76■□□□□ 0.91
HOMER3-206ENST00000594439 SBK3P0C264 359 aa20.76■□□□□ 0.91
HOMER3-206ENST00000594439 EPB42P16452 691 aa20.76■□□□□ 0.91
HOMER3-206ENST00000594439 ALOX12P18054 663 aa20.76■□□□□ 0.91
HOMER3-206ENST00000594439 GSTM2P28161 218 aa20.76■□□□□ 0.91
HOMER3-206ENST00000594439 SLCO1A2P46721 670 aa20.76■□□□□ 0.91
HOMER3-206ENST00000594439 LAPTM5Q13571 262 aa20.76■□□□□ 0.91
HOMER3-206ENST00000594439 HERC3Q15034 1050 aa20.76■□□□□ 0.91
HOMER3-206ENST00000594439 RASA2Q15283 850 aa20.76■□□□□ 0.91
HOMER3-206ENST00000594439 EMBQ6PCB8 327 aa20.76■□□□□ 0.91
HOMER3-206ENST00000594439 VN1R5Q7Z5H4 357 aa20.76■□□□□ 0.91
HOMER3-206ENST00000594439 LAPTM4BQ86VI4 370 aa20.76■□□□□ 0.91
HOMER3-206ENST00000594439 ZC3H7AQ8IWR0 971 aaKnown RBP20.76■□□□□ 0.91
HOMER3-206ENST00000594439 ACMSDQ8TDX5 336 aa20.76■□□□□ 0.91
HOMER3-206ENST00000594439 NACC2Q96BF6 587 aa20.76■□□□□ 0.91
HOMER3-206ENST00000594439 SEC16BQ96JE7 1060 aa20.76■□□□□ 0.91
HOMER3-206ENST00000594439 CRB3Q9BUF7 120 aa20.76■□□□□ 0.91
HOMER3-206ENST00000594439 ING2Q9H160 280 aa20.76■□□□□ 0.91
HOMER3-206ENST00000594439 MRPL46Q9H2W6 279 aaKnown RBP20.76■□□□□ 0.91
HOMER3-206ENST00000594439 SEMA3GQ9NS98 782 aa20.76■□□□□ 0.91
HOMER3-206ENST00000594439 C14orf105Q9NVL8 296 aa20.76■□□□□ 0.91
HOMER3-206ENST00000594439 P4HTMQ9NXG6 502 aa20.76■□□□□ 0.91
HOMER3-206ENST00000594439 NAALAD2Q9Y3Q0 740 aa20.76■□□□□ 0.91
HOMER3-206ENST00000594439 TNPO3Q9Y5L0 923 aaKnown RBP20.76■□□□□ 0.91
HOMER3-206ENST00000594439 GALR3O60755 368 aaPredicted RBP20.75■□□□□ 0.91
HOMER3-206ENST00000594439 RDH16O75452 317 aa20.75■□□□□ 0.91
HOMER3-206ENST00000594439 DNAJB5O75953 348 aa20.75■□□□□ 0.91
HOMER3-206ENST00000594439 C1QL1O75973 258 aa20.75■□□□□ 0.91
HOMER3-206ENST00000594439 B3GALT4O96024 378 aa20.75■□□□□ 0.91
HOMER3-206ENST00000594439 IGHEP01854 428 aa20.75■□□□□ 0.91
HOMER3-206ENST00000594439 ZNF888P0CJ79 500 aaPredicted RBP20.75■□□□□ 0.91
HOMER3-206ENST00000594439 SMIM10L1P0DMW3 83 aa20.75■□□□□ 0.91
HOMER3-206ENST00000594439 SFTPCP11686 197 aa20.75■□□□□ 0.91
HOMER3-206ENST00000594439 PAGE2BQ5JRK9 111 aa20.75■□□□□ 0.91
HOMER3-206ENST00000594439 ADNP2Q6IQ32 1131 aa20.75■□□□□ 0.91
HOMER3-206ENST00000594439 METTL2BQ6P1Q9 378 aaKnown RBP20.75■□□□□ 0.91
HOMER3-206ENST00000594439 MED25Q71SY5 747 aa20.75■□□□□ 0.91
HOMER3-206ENST00000594439 LCA5Q86VQ0 697 aa20.75■□□□□ 0.91
HOMER3-206ENST00000594439 CYP4X1Q8N118 509 aa20.75■□□□□ 0.91
HOMER3-206ENST00000594439 TMEM102Q8N9M5 508 aaPredicted RBP20.75■□□□□ 0.91
HOMER3-206ENST00000594439 EPS8L3Q8TE67 593 aaKnown RBP20.75■□□□□ 0.91
HOMER3-206ENST00000594439 SMIM10Q96HG1 83 aa20.75■□□□□ 0.91
HOMER3-206ENST00000594439 PARD6BQ9BYG5 372 aa20.75■□□□□ 0.91
HOMER3-206ENST00000594439 RHBGQ9H310 441 aa20.75■□□□□ 0.91
HOMER3-206ENST00000594439 TMEM216Q9P0N5 145 aa20.75■□□□□ 0.91
HOMER3-206ENST00000594439 HCN3Q9P1Z3 774 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms