RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 OR5K3A6NET4 321 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 TRABD2BA6NFA1 517 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 ANKDD1BA6NHY2 528 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 TNFSF14O43557 240 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 CLEC3AO75596 197 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 KRT34O76011 436 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 GIMD1P0DJR0 217 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 PRPS2P11908 318 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 EZRP15311 586 aaKnown RBP12.89□□□□□ -0.35
VMP1-217ENST00000593168 UGT2B7P16662 529 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 AMD1P17707 334 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 POLR2CP19387 275 aaPredicted RBP12.89□□□□□ -0.35
VMP1-217ENST00000593168 PTX3P26022 381 aaPredicted RBP12.89□□□□□ -0.35
VMP1-217ENST00000593168 PTPN4P29074 926 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 EPHA8P29322 1005 aaPredicted RBP12.89□□□□□ -0.35
VMP1-217ENST00000593168 RELAQ04206 551 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 BIRC2Q13490 618 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 CAMK2BQ13554 666 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 CUL3Q13618 768 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 CYLC2Q14093 348 aaPredicted RBP12.89□□□□□ -0.35
VMP1-217ENST00000593168 SLC5A12Q1EHB4 618 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 AGKQ53H12 422 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 CACHD1Q5VU97 1274 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 KIAA1614Q5VZ46 1190 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 ADNP2Q6IQ32 1131 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 PAOXQ6QHF9 649 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 KANSL1Q7Z3B3 1105 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 VN1R5Q7Z5H4 357 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 ADCK2Q7Z695 626 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 ARL10Q8N8L6 244 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 OR10G6Q8NH81 332 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 TSPEARQ8WU66 669 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 CHTF18Q8WVB6 975 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 ZUFSPQ96AP4 578 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 C11orf24Q96F05 449 aaPredicted RBP12.89□□□□□ -0.35
VMP1-217ENST00000593168 APIPQ96GX9 242 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 SLC38A3Q99624 504 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 C1orf50Q9BV19 199 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 TBC1D10AQ9BXI6 508 aa12.89□□□□□ -0.35
VMP1-217ENST00000593168 RUVBL1Q9Y265 456 aaKnown RBP12.89□□□□□ -0.35
VMP1-217ENST00000593168 CABIN1Q9Y6J0 2220 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 GSAPA4D1B5 854 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 FAM149AA5PLN7 773 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 EIF4E1BA6NMX2 242 aaKnown RBP12.88□□□□□ -0.35
VMP1-217ENST00000593168 B2RBV5 119 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 ANKRD28O15084 1053 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 FLRT2O43155 660 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 OR1F1O43749 312 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 LCMT2O60294 686 aaKnown RBP12.88□□□□□ -0.35
VMP1-217ENST00000593168 DNAJC8O75937 253 aaPredicted RBP12.88□□□□□ -0.35
VMP1-217ENST00000593168 MYO1DO94832 1006 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 ETHE1O95571 254 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 SNRPB2P08579 225 aaKnown RBP12.88□□□□□ -0.35
VMP1-217ENST00000593168 G6PDP11413 515 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 AHRP35869 848 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 GRIA3P42263 894 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 ACSM2AQ08AH3 577 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 TBL3Q12788 808 aaKnown RBP12.88□□□□□ -0.35
VMP1-217ENST00000593168 STX5Q13190 355 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 SPIN4Q56A73 249 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 ACSM2BQ68CK6 577 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 ARMC6Q6NXE6 501 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 CYP20A1Q6UW02 462 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 SPESP1Q6UW49 350 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 ASRGL1Q7L266 308 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 PAQR7Q86WK9 346 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 SNX32Q86XE0 403 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 FUNDC1Q8IVP5 155 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 FAM20CQ8IXL6 584 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.88□□□□□ -0.35
VMP1-217ENST00000593168 RNF175Q8N4F7 328 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 POU5F2Q8N7G0 328 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 ANKRD53Q8N9V6 530 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 COL26A1Q96A83 441 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 KLHL29Q96CT2 875 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 APOLD1Q96LR9 279 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 CDC6Q99741 560 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 BTBD10Q9BSF8 475 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 SLC25A23Q9BV35 468 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 DUSP23Q9BVJ7 150 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 C1orf21Q9H246 121 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 LRMDAQ9H2I8 198 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 AHSPQ9NZD4 102 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 CCDC167Q9P0B6 97 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 POLR3HQ9Y535 204 aaPredicted RBP12.88□□□□□ -0.35
VMP1-217ENST00000593168 PCDHGB2Q9Y5G2 931 aa12.88□□□□□ -0.35
VMP1-217ENST00000593168 HELZ2Q9BYK8 2649 aaKnown RBP12.87□□□□□ -0.35
VMP1-217ENST00000593168 A0A087WV48 116 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 A0A0J9YY10 115 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 FEZF1A0PJY2 475 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 DYTNA2CJ06 578 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 OR2A25A4D2G3 310 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 NUDT21O43809 227 aaKnown RBP12.87□□□□□ -0.35
VMP1-217ENST00000593168 SLC22A3O75751 556 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 UBXN7O94888 489 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 SEMA3DO95025 777 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 TGFB1P01137 390 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 PRB1P04280 392 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 CD1EP15812 388 aa12.87□□□□□ -0.35
VMP1-217ENST00000593168 JAK1P23458 1154 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms