RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 TM9SF3Q9HD45 589 aa15.13■□□□□ 0.01
MBD1-227ENST00000592060 LTB4R2Q9NPC1 389 aa15.13■□□□□ 0.01
MBD1-227ENST00000592060 SH3BP4Q9P0V3 963 aa15.13■□□□□ 0.01
MBD1-227ENST00000592060 SAP18O00422 153 aaKnown RBP15.12■□□□□ 0.01
MBD1-227ENST00000592060 GBAP04062 536 aa15.12■□□□□ 0.01
MBD1-227ENST00000592060 PRKACGP22612 351 aa15.12■□□□□ 0.01
MBD1-227ENST00000592060 PCGF2P35227 344 aa15.12■□□□□ 0.01
MBD1-227ENST00000592060 MVDP53602 400 aa15.12■□□□□ 0.01
MBD1-227ENST00000592060 CRYBA2P53672 197 aa15.12■□□□□ 0.01
MBD1-227ENST00000592060 VLDLRP98155 873 aa15.12■□□□□ 0.01
MBD1-227ENST00000592060 DYNC1I2Q13409 638 aaKnown RBP15.12■□□□□ 0.01
MBD1-227ENST00000592060 AGERQ15109 404 aa15.12■□□□□ 0.01
MBD1-227ENST00000592060 RGNQ15493 299 aa15.12■□□□□ 0.01
MBD1-227ENST00000592060 CST6Q15828 149 aa15.12■□□□□ 0.01
MBD1-227ENST00000592060 MPEG1Q2M385 716 aa15.12■□□□□ 0.01
MBD1-227ENST00000592060 OR2T5Q6IEZ7 315 aa15.12■□□□□ 0.01
MBD1-227ENST00000592060 VTCN1Q7Z7D3 282 aa15.12■□□□□ 0.01
MBD1-227ENST00000592060 DCP2Q8IU60 420 aaKnown RBP15.12■□□□□ 0.01
MBD1-227ENST00000592060 OR2T29Q8NH02 315 aa15.12■□□□□ 0.01
MBD1-227ENST00000592060 TFGQ92734 400 aaPredicted RBP15.12■□□□□ 0.01
MBD1-227ENST00000592060 UBE2E3Q969T4 207 aa15.12■□□□□ 0.01
MBD1-227ENST00000592060 HSH2DQ96JZ2 352 aa15.12■□□□□ 0.01
MBD1-227ENST00000592060 PRM3Q9NNZ6 103 aa15.12■□□□□ 0.01
MBD1-227ENST00000592060 TM7SF3Q9NS93 570 aa15.12■□□□□ 0.01
MBD1-227ENST00000592060 LAMA3Q16787 3333 aa15.12■□□□□ 0.01
MBD1-227ENST00000592060 HS6ST1O60243 411 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 PHEXP78562 749 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 MC1RQ01726 317 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 CAMK2GQ13555 558 aaPredicted RBP15.11■□□□□ 0.01
MBD1-227ENST00000592060 ZC3H12BQ5HYM0 836 aaKnown RBP15.11■□□□□ 0.01
MBD1-227ENST00000592060 METRNLQ641Q3 311 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 ZNF773Q6PK81 442 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 CEP68Q76N32 757 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 CACUL1Q86Y37 369 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 ARL10Q8N8L6 244 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 ZNF555Q8NEP9 628 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 OR4K1Q8NGD4 311 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 OR5K2Q8NHB8 316 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 CDCA3Q99618 268 aaPredicted RBP15.11■□□□□ 0.01
MBD1-227ENST00000592060 BARD1Q99728 777 aaKnown RBP15.11■□□□□ 0.01
MBD1-227ENST00000592060 NRTNQ99748 197 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 MENTQ9BUN1 341 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 TEX101Q9BY14 249 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 MBNL1Q9NR56 388 aaKnown RBP15.11■□□□□ 0.01
MBD1-227ENST00000592060 DDX18Q9NVP1 670 aaKnown RBP15.11■□□□□ 0.01
MBD1-227ENST00000592060 SERGEFQ9UGK8 458 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 C3orf18Q9UK00 162 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 PCDHGA8Q9Y5G5 932 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 DNMT3AQ9Y6K1 912 aaPredicted RBP15.11■□□□□ 0.01
MBD1-227ENST00000592060 AP1M2Q9Y6Q5 423 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 U3KQV3 271 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 DOCK9Q9BZ29 2069 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 EPOPA6NHQ4 379 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 FABP3P05413 133 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 RPL3P39023 403 aaKnown RBP15.11■□□□□ 0.01
MBD1-227ENST00000592060 WASP42768 502 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 ESRRGP62508 458 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 HBA1P69905 142 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 CTBSQ01459 385 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 ARHGAP19Q14CB8 494 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 CYP2A13Q16696 494 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 PRSS53Q2L4Q9 553 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 RFX4Q33E94 735 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 IQCCQ4KMZ1 466 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 RBM48Q5RL73 367 aaKnown RBP15.11■□□□□ 0.01
MBD1-227ENST00000592060 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.11■□□□□ 0.01
MBD1-227ENST00000592060 IER5LQ5T953 404 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 SYCE2Q6PIF2 218 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 TMIGD1Q6UXZ0 262 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.11■□□□□ 0.01
MBD1-227ENST00000592060 ZNF852Q6ZMS4 543 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 TMEM26Q6ZUK4 368 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 R3HCC1LQ7Z5L2 792 aaKnown RBP15.11■□□□□ 0.01
MBD1-227ENST00000592060 YAF2Q8IY57 180 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 C2orf73Q8N5S3 287 aaPredicted RBP15.11■□□□□ 0.01
MBD1-227ENST00000592060 CHDHQ8NE62 594 aaPredicted RBP15.11■□□□□ 0.01
MBD1-227ENST00000592060 HDAC2Q92769 488 aaKnown RBP15.11■□□□□ 0.01
MBD1-227ENST00000592060 MYADMQ96S97 322 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 KXD1Q9BQD3 176 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 ING2Q9H160 280 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 PELI2Q9HAT8 420 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 ATAD3AQ9NVI7 634 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 GPATCH2Q9NW75 528 aa15.11■□□□□ 0.01
MBD1-227ENST00000592060 TDRKHQ9Y2W6 561 aaKnown RBP15.11■□□□□ 0.01
MBD1-227ENST00000592060 TMEM229AB2RXF0 380 aa15.1■□□□□ 0.01
MBD1-227ENST00000592060 hCG_2039718K7EN88 272 aa15.1■□□□□ 0.01
MBD1-227ENST00000592060 B4GAT1O43505 415 aa15.1■□□□□ 0.01
MBD1-227ENST00000592060 GPR37L1O60883 481 aa15.1■□□□□ 0.01
MBD1-227ENST00000592060 CPNE6O95741 557 aa15.1■□□□□ 0.01
MBD1-227ENST00000592060 C6orf47O95873 294 aa15.1■□□□□ 0.01
MBD1-227ENST00000592060 TBX6O95947 436 aaPredicted RBP15.1■□□□□ 0.01
MBD1-227ENST00000592060 APODP05090 189 aa15.1■□□□□ 0.01
MBD1-227ENST00000592060 ITGAMP11215 1152 aa15.1■□□□□ 0.01
MBD1-227ENST00000592060 IL7RP16871 459 aa15.1■□□□□ 0.01
MBD1-227ENST00000592060 TEAD1P28347 426 aa15.1■□□□□ 0.01
MBD1-227ENST00000592060 PMS2P3Q13401 168 aa15.1■□□□□ 0.01
MBD1-227ENST00000592060 IRF4Q15306 451 aa15.1■□□□□ 0.01
MBD1-227ENST00000592060 SHHQ15465 462 aa15.1■□□□□ 0.01
MBD1-227ENST00000592060 CTU2Q2VPK5 515 aaKnown RBP15.1■□□□□ 0.01
MBD1-227ENST00000592060 KCTD8Q6ZWB6 473 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms