RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 OTUD6BQ8N6M0 293 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 OR2L3Q8NG85 312 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-226ENST00000591534 METTL21AQ8WXB1 218 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 SMPDL3AQ92484 453 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 NR4A3Q92570 626 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 IL17FQ96PD4 163 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 IL22Q9GZX6 179 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 MKKSQ9NPJ1 570 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-226ENST00000591534 BFARQ9NZS9 450 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 SAMD15Q9P1V8 674 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 PTGFRNQ9P2B2 879 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 TRPC4Q9UBN4 977 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 SLC2A6Q9UGQ3 507 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 NEU2Q9Y3R4 380 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 CSAG2Q9Y5P2 127 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 SEC16AO15027 2179 aa8.96□□□□□ -0.97
BRCA1-226ENST00000591534 IGLV3-12A0A075B6K2 115 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 TRGV8A0A0C4DH27 118 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 TCRBV7S3A2A0A539 114 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 IQCF5A8MTL0 148 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 IDSB3KWA1 339 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 PRICKLE3O43900 615 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-226ENST00000591534 CTSVO60911 334 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 KLHL18O94889 574 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 RASAL1O95294 804 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 CYC1P08574 325 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 GSTP1P09211 210 aaKnown RBP8.96□□□□□ -0.98
BRCA1-226ENST00000591534 MYZAPP0CAP1 466 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 HOXB4P17483 251 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-226ENST00000591534 RPS3P23396 243 aaKnown RBP eCLIP8.96□□□□□ -0.98
BRCA1-226ENST00000591534 LORP23490 312 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-226ENST00000591534 VSNL1P62760 191 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 SLC7A5Q01650 507 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 GRB7Q14451 532 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 ARHGAP19Q14CB8 494 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 NDUFA9Q16795 377 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 VWA2Q5GFL6 755 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 LGSNQ5TDP6 509 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 ABHD17BQ5VST6 288 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 HIBCHQ6NVY1 386 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-226ENST00000591534 ZNF534Q76KX8 674 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 RNF44Q7L0R7 432 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 MCEMP1Q8IX19 187 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 PRSS58Q8IYP2 241 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 KRT222Q8N1A0 295 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 CSNK1A1LQ8N752 337 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 CATSPER1Q8NEC5 780 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 MCOLN3Q8TDD5 553 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 BRIX1Q8TDN6 353 aaKnown RBP8.96□□□□□ -0.98
BRCA1-226ENST00000591534 MMABQ96EY8 250 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-226ENST00000591534 EBNA1BP2Q99848 306 aaKnown RBP8.96□□□□□ -0.98
BRCA1-226ENST00000591534 TUBB6Q9BUF5 446 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 RNF32Q9H0A6 362 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 MRPS30Q9NP92 439 aaKnown RBP8.96□□□□□ -0.98
BRCA1-226ENST00000591534 MED4Q9NPJ6 270 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 ABI3Q9P2A4 366 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 CIDEBQ9UHD4 219 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 NFU1Q9UMS0 254 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 SNX24Q9Y343 169 aa8.96□□□□□ -0.98
BRCA1-226ENST00000591534 HIVEP3Q5T1R4 2406 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 LRBAP50851 2863 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 SPTBP11277 2137 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 A0A1W2PQ72 361 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 FAM221AA4D161 298 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 OR2A25A4D2G3 310 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 ESR1P03372 595 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 CATP04040 527 aaKnown RBP8.95□□□□□ -0.98
BRCA1-226ENST00000591534 ABHD2P08910 425 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 COX6A1P12074 109 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 COX6B1P14854 86 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 EZRP15311 586 aaKnown RBP8.95□□□□□ -0.98
BRCA1-226ENST00000591534 PAMP19021 973 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 RPL21P46778 160 aaKnown RBP8.95□□□□□ -0.98
BRCA1-226ENST00000591534 AVPR1BP47901 424 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 NPY2RP49146 381 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 SMSP52788 366 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 ITGA8P53708 1063 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 CRADDP78560 199 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 ABATP80404 500 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 RELAQ04206 551 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 IFFO1Q0D2I5 559 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 Q0VFX4 171 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 SEMA3AQ14563 771 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 POU4F3Q15319 338 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 TRIP13Q15645 432 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-226ENST00000591534 ZXDCQ2QGD7 858 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-226ENST00000591534 PRTGQ2VWP7 1150 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 TTLL9Q3SXZ7 439 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 RNASEH2BQ5TBB1 312 aaKnown RBP8.95□□□□□ -0.98
BRCA1-226ENST00000591534 FRMPD2BQ6IN97 320 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 XKRXQ6PP77 449 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 LRIG3Q6UXM1 1119 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 CYS1Q717R9 158 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 TAOK1Q7L7X3 1001 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 GDF7Q7Z4P5 450 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 RIBC1Q8N443 379 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-226ENST00000591534 ZNF808Q8N4W9 903 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-226ENST00000591534 OR2A1Q8NGT9 310 aa8.95□□□□□ -0.98
BRCA1-226ENST00000591534 OR9A1PQ8NGU1 263 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms