RNA–Protein interactions for RNA: ENST00000590959.5

SPHK1-207, Transcript of sphingosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK1, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-207ENST00000590959 HSD3B2P26439 372 aa18.69■□□□□ 0.58
SPHK1-207ENST00000590959 KCNK10P57789 538 aa18.69■□□□□ 0.58
SPHK1-207ENST00000590959 UFM1P61960 85 aa18.69■□□□□ 0.58
SPHK1-207ENST00000590959 ILF3Q12906 894 aaKnown RBP eCLIP18.69■□□□□ 0.58
SPHK1-207ENST00000590959 LAPTM5Q13571 262 aa18.69■□□□□ 0.58
SPHK1-207ENST00000590959 HIST2H2ACQ16777 129 aaPredicted RBP18.69■□□□□ 0.58
SPHK1-207ENST00000590959 HIST2H2AA3Q6FI13 130 aa18.69■□□□□ 0.58
SPHK1-207ENST00000590959 HMBOX1Q6NT76 420 aa18.69■□□□□ 0.58
SPHK1-207ENST00000590959 BLOC1S3Q6QNY0 202 aa18.69■□□□□ 0.58
SPHK1-207ENST00000590959 CYP20A1Q6UW02 462 aa18.69■□□□□ 0.58
SPHK1-207ENST00000590959 OR7G3Q8NG95 312 aa18.69■□□□□ 0.58
SPHK1-207ENST00000590959 CCL4L1Q8NHW4 92 aa18.69■□□□□ 0.58
SPHK1-207ENST00000590959 CMTM7Q96FZ5 175 aa18.69■□□□□ 0.58
SPHK1-207ENST00000590959 KLHDC7BQ96G42 594 aa18.69■□□□□ 0.58
SPHK1-207ENST00000590959 SEMA6AQ9H2E6 1030 aa18.69■□□□□ 0.58
SPHK1-207ENST00000590959 CAAP1Q9H8G2 361 aa18.69■□□□□ 0.58
SPHK1-207ENST00000590959 BRF2Q9HAW0 419 aa18.69■□□□□ 0.58
SPHK1-207ENST00000590959 SCHIP1Q9P0W5 487 aaPredicted RBP18.69■□□□□ 0.58
SPHK1-207ENST00000590959 TAC3Q9UHF0 121 aa18.69■□□□□ 0.58
SPHK1-207ENST00000590959 DHRS12A0PJE2 317 aa18.68■□□□□ 0.58
SPHK1-207ENST00000590959 H3BSA7 217 aa18.68■□□□□ 0.58
SPHK1-207ENST00000590959 CD27P26842 260 aa18.68■□□□□ 0.58
SPHK1-207ENST00000590959 NDUFS1P28331 727 aa18.68■□□□□ 0.58
SPHK1-207ENST00000590959 ATXN3P54252 364 aaPredicted RBP18.68■□□□□ 0.58
SPHK1-207ENST00000590959 DDX39BQ13838 428 aaKnown RBP18.68■□□□□ 0.58
SPHK1-207ENST00000590959 SLBPQ14493 270 aaKnown RBP eCLIP18.68■□□□□ 0.58
SPHK1-207ENST00000590959 KIAA0040Q15053 153 aa18.68■□□□□ 0.58
SPHK1-207ENST00000590959 TCEA2Q15560 299 aa18.68■□□□□ 0.58
SPHK1-207ENST00000590959 ZBED5Q49AG3 693 aa18.68■□□□□ 0.58
SPHK1-207ENST00000590959 AASDHQ4L235 1098 aaPredicted RBP18.68■□□□□ 0.58
SPHK1-207ENST00000590959 TMTC4Q5T4D3 741 aa18.68■□□□□ 0.58
SPHK1-207ENST00000590959 ARMCX6Q7L4S7 300 aa18.68■□□□□ 0.58
SPHK1-207ENST00000590959 GPR141Q7Z602 305 aa18.68■□□□□ 0.58
SPHK1-207ENST00000590959 C17orf64Q86WR6 236 aa18.68■□□□□ 0.58
SPHK1-207ENST00000590959 OR52E1Q8NGJ3 308 aa18.68■□□□□ 0.58
SPHK1-207ENST00000590959 ZNF420Q8TAQ5 688 aaPredicted RBP18.68■□□□□ 0.58
SPHK1-207ENST00000590959 PROKR1Q8TCW9 393 aa18.68■□□□□ 0.58
SPHK1-207ENST00000590959 GAB3Q8WWW8 586 aa18.68■□□□□ 0.58
SPHK1-207ENST00000590959 CENPNQ96H22 339 aaPredicted RBP18.68■□□□□ 0.58
SPHK1-207ENST00000590959 HSPA12BQ96MM6 686 aa18.68■□□□□ 0.58
SPHK1-207ENST00000590959 MTERF1Q99551 399 aaKnown RBP18.68■□□□□ 0.58
SPHK1-207ENST00000590959 ACAT2Q9BWD1 397 aa18.68■□□□□ 0.58
SPHK1-207ENST00000590959 TMED5Q9Y3A6 229 aa18.68■□□□□ 0.58
SPHK1-207ENST00000590959 SPAG17Q6Q759 2223 aa18.68■□□□□ 0.58
SPHK1-207ENST00000590959 PCNAP12004 261 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 PKLRP30613 574 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 RCAN2Q14206 197 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 VPS26BQ4G0F5 336 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 PHACTR4Q8IZ21 702 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 OR2L8Q8NGY9 312 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 TEX37Q96LM6 180 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 SLC6A18Q96N87 628 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 NRTNQ99748 197 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 CIB1Q99828 191 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 KIR3DX1Q9H7L2 352 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 AGPAT4Q9NRZ5 378 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 DDX18Q9NVP1 670 aaKnown RBP18.67■□□□□ 0.58
SPHK1-207ENST00000590959 VPS29Q9UBQ0 182 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 PIPSLA2A3N6 862 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 FAM234BA2RU67 622 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 CDH1P12830 882 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 F3P13726 295 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 MAPK1P28482 360 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 GRIA3P42263 894 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 POLR2JP52435 117 aaKnown RBP18.67■□□□□ 0.58
SPHK1-207ENST00000590959 FZD2Q14332 565 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 TBCELQ5QJ74 424 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 SLC36A4Q6YBV0 504 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 PRR23BQ6ZRT6 265 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 LAS2Q8IYD9 372 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 LINC01555Q8NAE3 123 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 HUS1BQ8NHY5 278 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 RNF217Q8TC41 542 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 PNPT1Q8TCS8 783 aaKnown RBP18.67■□□□□ 0.58
SPHK1-207ENST00000590959 UBE2E3Q969T4 207 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 SLC29A1Q99808 456 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 LRFN3Q9BTN0 628 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 PRM3Q9NNZ6 103 aa18.67■□□□□ 0.58
SPHK1-207ENST00000590959 A0A1W2PPV9 198 aa18.66■□□□□ 0.58
SPHK1-207ENST00000590959 C9JVG2 144 aa18.66■□□□□ 0.58
SPHK1-207ENST00000590959 GALR2O43603 387 aaPredicted RBP18.66■□□□□ 0.58
SPHK1-207ENST00000590959 EML2O95834 649 aa18.66■□□□□ 0.58
SPHK1-207ENST00000590959 NPPAP01160 153 aa18.66■□□□□ 0.58
SPHK1-207ENST00000590959 ACPPP15309 386 aa18.66■□□□□ 0.58
SPHK1-207ENST00000590959 PCSK2P16519 638 aa18.66■□□□□ 0.58
SPHK1-207ENST00000590959 CAPN3P20807 821 aa18.66■□□□□ 0.58
SPHK1-207ENST00000590959 JAK1P23458 1154 aa18.66■□□□□ 0.58
SPHK1-207ENST00000590959 EIF2B5Q13144 721 aaKnown RBP18.66■□□□□ 0.58
SPHK1-207ENST00000590959 SPRED1Q7Z699 444 aa18.66■□□□□ 0.58
SPHK1-207ENST00000590959 PARGQ86W56 976 aa18.66■□□□□ 0.58
SPHK1-207ENST00000590959 NRROSQ86YC3 692 aa18.66■□□□□ 0.58
SPHK1-207ENST00000590959 DCP2Q8IU60 420 aaKnown RBP18.66■□□□□ 0.58
SPHK1-207ENST00000590959 KRT78Q8N1N4 520 aa18.66■□□□□ 0.58
SPHK1-207ENST00000590959 LIX1Q8N485 282 aa18.66■□□□□ 0.58
SPHK1-207ENST00000590959 ZBTB44Q8NCP5 570 aa18.66■□□□□ 0.58
SPHK1-207ENST00000590959 GPBAR1Q8TDU6 330 aa18.66■□□□□ 0.58
SPHK1-207ENST00000590959 CANT1Q8WVQ1 401 aa18.66■□□□□ 0.58
SPHK1-207ENST00000590959 METTL2AQ96IZ6 378 aaKnown RBP18.66■□□□□ 0.58
SPHK1-207ENST00000590959 GSDMCQ9BYG8 508 aa18.66■□□□□ 0.58
SPHK1-207ENST00000590959 DUSP15Q9H1R2 295 aaPredicted RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms