RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 HACD3Q9P035 362 aa5.72□□□□□ -1.49
VPS25-204ENST00000589577 WHRNQ9P202 907 aa5.72□□□□□ -1.49
VPS25-204ENST00000589577 PLAGL1Q9UM63 463 aa5.72□□□□□ -1.49
VPS25-204ENST00000589577 KMT2CQ8NEZ4 4911 aaKnown RBP5.72□□□□□ -1.49
VPS25-204ENST00000589577 HEATR5BQ9P2D3 2071 aa5.71□□□□□ -1.49
VPS25-204ENST00000589577 LOC105369274A0A096LPK9 316 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 LOC102723532A0A0G2JNH3 316 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 GLYATL1P3A0A0U1RQE8 302 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 C2orf81A6NN90 581 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 ISM1B1AKI9 464 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 PFDN6O15212 129 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 BUD23O43709 281 aaKnown RBP5.71□□□□□ -1.5
VPS25-204ENST00000589577 PRMT3O60678 531 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 SUN1O94901 812 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 SEC31AO94979 1220 aaKnown RBP5.71□□□□□ -1.5
VPS25-204ENST00000589577 CRTAMO95727 393 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 NDST3O95803 873 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 EPOP01588 193 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 HEXBP07686 556 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 EPXP11678 715 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 MLNP12872 115 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 PAMP19021 973 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 TPSB2P20231 275 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 MSH3P20585 1137 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 RPL22P35268 128 aaKnown RBP5.71□□□□□ -1.5
VPS25-204ENST00000589577 PEX19P40855 299 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 CD151P48509 253 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 TERF1P54274 439 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 PLTPP55058 493 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 WNT3AP56704 352 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 VSX2P58304 361 aaPredicted RBP5.71□□□□□ -1.5
VPS25-204ENST00000589577 SNRPNP63162 240 aaKnown RBP5.71□□□□□ -1.5
VPS25-204ENST00000589577 OC90Q02509 493 aaPredicted RBP5.71□□□□□ -1.5
VPS25-204ENST00000589577 PTPRCAPQ14761 206 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 KIR2DS3Q14952 304 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 TPSAB1Q15661 275 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 MEP1AQ16819 746 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 SYT16Q17RD7 645 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 FAM214AQ32MH5 1076 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 FBXL19-AS1Q494R0 122 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 TCTE1Q5JU00 501 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 WASHC2DQ5SRD0 308 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 CATSPEREQ5SY80 951 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 C10orf62Q5T681 223 aaPredicted RBP5.71□□□□□ -1.5
VPS25-204ENST00000589577 PRMT9Q6P2P2 845 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 POMZP3Q6PJE2 187 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 B3GNT6Q6ZMB0 384 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 SEM1Q6ZVN7 128 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 MICALCLQ6ZW33 695 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 CCDC25Q86WR0 208 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 OR4N4Q8N0Y3 316 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 TTC29Q8NA56 475 aaPredicted RBP5.71□□□□□ -1.5
VPS25-204ENST00000589577 ZFP62Q8NB50 900 aaPredicted RBP5.71□□□□□ -1.5
VPS25-204ENST00000589577 NOA1Q8NC60 698 aaKnown RBP5.71□□□□□ -1.5
VPS25-204ENST00000589577 MAPK1IP1LQ8NDC0 245 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 PPHLN1Q8NEY8 458 aaKnown RBP5.71□□□□□ -1.5
VPS25-204ENST00000589577 IFT81Q8WYA0 676 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.71□□□□□ -1.5
VPS25-204ENST00000589577 TFGQ92734 400 aaPredicted RBP5.71□□□□□ -1.5
VPS25-204ENST00000589577 SECISBP2Q96T21 854 aaKnown RBP5.71□□□□□ -1.5
VPS25-204ENST00000589577 FMO2Q99518 471 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 SELENOSQ9BQE4 189 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 NAT9Q9BTE0 207 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 LRRC1Q9BTT6 524 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 FICDQ9BVA6 458 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 TGIF2Q9GZN2 237 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 ATG10Q9H0Y0 220 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 TRABDQ9H4I3 376 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 TRIM45Q9H8W5 580 aaPredicted RBP5.71□□□□□ -1.5
VPS25-204ENST00000589577 ETNK1Q9HBU6 452 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 C14orf105Q9NVL8 296 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 UBP1Q9NZI7 540 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 OR6C2Q9NZP2 312 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 TRPC4Q9UBN4 977 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 SNX24Q9Y343 169 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 PKP3Q9Y446 797 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 NPFFR2Q9Y5X5 522 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 RYR3Q15413 4870 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 TRRAPQ9Y4A5 3859 aa5.71□□□□□ -1.5
VPS25-204ENST00000589577 A0A087X1B8 175 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 TUBAL3A6NHL2 446 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 NPIPA2E9PIF3 369 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 NPIPA3F8WFD2 350 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 IFRD1O00458 451 aaPredicted RBP5.7□□□□□ -1.5
VPS25-204ENST00000589577 EIF3HO15372 352 aaKnown RBP eCLIP5.7□□□□□ -1.5
VPS25-204ENST00000589577 SOX30O94993 753 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 ZSCAN5DPP0CG00 497 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 C8orf89P0DMQ9 161 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 ETS1P14921 441 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 ACADLP28330 430 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 TPP2P29144 1249 aaPredicted RBP5.7□□□□□ -1.5
VPS25-204ENST00000589577 PHBP35232 272 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 PPARGP37231 505 aaPredicted RBP5.7□□□□□ -1.5
VPS25-204ENST00000589577 SLC26A3P40879 764 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 NPY2RP49146 381 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 ITGA8P53708 1063 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 SESN2P58004 480 aaPredicted RBP5.7□□□□□ -1.5
VPS25-204ENST00000589577 SLC7A5Q01650 507 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 ITGA9Q13797 1035 aa5.7□□□□□ -1.5
VPS25-204ENST00000589577 SLMAPQ14BN4 828 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms