RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 PCDHGB7Q9Y5F8 929 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 PCDHGA9Q9Y5G4 932 aaKnown RBP9.59□□□□□ -0.87
TPM4-207ENST00000588032 GALR3O60755 368 aaPredicted RBP9.58□□□□□ -0.88
TPM4-207ENST00000588032 CLEC3AO75596 197 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 CEACAM4O75871 244 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 WFS1O76024 890 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 SERPIND1P05546 499 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 MYBL2P10244 700 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 ALOX12P18054 663 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 VARSP26640 1264 aaKnown RBP9.58□□□□□ -0.88
TPM4-207ENST00000588032 GCAP28676 217 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 SERPINB1P30740 379 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 GMPRP36959 345 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 CCL11P51671 97 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 EMP2P54851 167 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 SOX8P57073 446 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 CHIT1Q13231 466 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 ATP1A4Q13733 1029 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 DOC2AQ14183 400 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 SLBPQ14493 270 aaKnown RBP eCLIP9.58□□□□□ -0.88
TPM4-207ENST00000588032 RASA2Q15283 850 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 RBBP7Q16576 425 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 PFKFB4Q16877 469 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 VWA2Q5GFL6 755 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 TECRLQ5HYJ1 363 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 DCAF10Q5QP82 559 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 FAM69BQ5VUD6 431 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 WDR93Q6P2C0 686 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 PPP1R32Q7Z5V6 425 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 HPS6Q86YV9 775 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 PLD6Q8N2A8 252 aaKnown RBP9.58□□□□□ -0.88
TPM4-207ENST00000588032 ZNF843Q8N446 348 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 AFAP1L2Q8N4X5 818 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 DTWD1Q8N5C7 304 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 ANKRD53Q8N9V6 530 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 CLEC1AQ8NC01 280 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 OR51Q1Q8NH59 317 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 CREB3L4Q8TEY5 395 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 UBLCP1Q8WVY7 318 aaPredicted RBP9.58□□□□□ -0.88
TPM4-207ENST00000588032 ESAMQ96AP7 390 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 SCYL1Q96KG9 808 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 MACROD1Q9BQ69 325 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 MRPL57Q9BQC6 102 aaKnown RBP9.58□□□□□ -0.88
TPM4-207ENST00000588032 SEMA4CQ9C0C4 833 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 SLC6A16Q9GZN6 736 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 MRPL46Q9H2W6 279 aaKnown RBP9.58□□□□□ -0.88
TPM4-207ENST00000588032 EPB41L4BQ9H329 900 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 SOX17Q9H6I2 414 aaPredicted RBP9.58□□□□□ -0.88
TPM4-207ENST00000588032 ATP13A2Q9NQ11 1180 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 PSMC3IPQ9P2W1 217 aaPredicted RBP9.58□□□□□ -0.88
TPM4-207ENST00000588032 ADGRE2Q9UHX3 823 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 C3orf18Q9UK00 162 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 MRPS2Q9Y399 296 aaKnown RBP9.58□□□□□ -0.88
TPM4-207ENST00000588032 NAALAD2Q9Y3Q0 740 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 ANGPTL3Q9Y5C1 460 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 HEATR5BQ9P2D3 2071 aa9.58□□□□□ -0.88
TPM4-207ENST00000588032 SEC16AO15027 2179 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 A0A088AWK7 358 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 IDSB3KWA1 339 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 B8ZZF3 427 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 STX16-NPEPL1H3BU86 382 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 SGK494L7N484 410 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 SOCS6O14544 535 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 STX16O14662 325 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 UGDHO60701 494 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 SMIM24O75264 130 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 C1QL1O75973 258 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 KLHL18O94889 574 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 BMP10O95393 424 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 STATHP02808 62 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 TUBBP07437 444 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 HEXBP07686 556 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 GSTA1P08263 222 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 SMIM10L1P0DMW3 83 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 IL1RNP18510 177 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 ZNF10P21506 573 aaPredicted RBP9.57□□□□□ -0.88
TPM4-207ENST00000588032 HNF4AP41235 474 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 AGTR2P50052 363 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 TGM3Q08188 693 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 AIMP2Q13155 320 aaKnown RBP9.57□□□□□ -0.88
TPM4-207ENST00000588032 COL9A2Q14055 689 aaPredicted RBP9.57□□□□□ -0.88
TPM4-207ENST00000588032 LACTB2Q53H82 288 aaPredicted RBP9.57□□□□□ -0.88
TPM4-207ENST00000588032 FBXO48Q5FWF7 155 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 LIPJQ5W064 366 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 KIRREL2Q6UWL6 708 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 TDRPQ86YL5 185 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 GSPT2Q8IYD1 628 aaKnown RBP9.57□□□□□ -0.88
TPM4-207ENST00000588032 SRFBP1Q8NEF9 429 aaKnown RBP9.57□□□□□ -0.88
TPM4-207ENST00000588032 ZCCHC10Q8TBK6 192 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 UTP15Q8TED0 518 aaKnown RBP9.57□□□□□ -0.88
TPM4-207ENST00000588032 MOCOSQ96EN8 888 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 SMIM10Q96HG1 83 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 OR1F2PQ96R84 312 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 SLC25A23Q9BV35 468 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 TRIM55Q9BYV6 548 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 SPNS1Q9H2V7 528 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 RHBGQ9H310 441 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 MLXIPLQ9NP71 852 aa9.57□□□□□ -0.88
TPM4-207ENST00000588032 CPSF2Q9P2I0 782 aaKnown RBP9.57□□□□□ -0.88
TPM4-207ENST00000588032 DCDC2Q9UHG0 476 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms