RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 RPL3LQ92901 407 aaKnown RBP17.91■□□□□ 0.46
DDX39A-206ENST00000587730 MAPKAP1Q9BPZ7 522 aa17.91■□□□□ 0.46
DDX39A-206ENST00000587730 DPH2Q9BQC3 489 aaPredicted RBP17.91■□□□□ 0.46
DDX39A-206ENST00000587730 RACGAP1Q9H0H5 632 aa17.91■□□□□ 0.46
DDX39A-206ENST00000587730 TMEM38AQ9H6F2 299 aa17.91■□□□□ 0.46
DDX39A-206ENST00000587730 PCDH12Q9NPG4 1184 aa17.91■□□□□ 0.46
DDX39A-206ENST00000587730 CNOT2Q9NZN8 540 aaKnown RBP17.91■□□□□ 0.46
DDX39A-206ENST00000587730 NDUFAF4Q9P032 175 aa17.91■□□□□ 0.46
DDX39A-206ENST00000587730 NFKBIL1Q9UBC1 381 aaPredicted RBP17.91■□□□□ 0.46
DDX39A-206ENST00000587730 ATP11BQ9Y2G3 1177 aa17.91■□□□□ 0.46
DDX39A-206ENST00000587730 SH3BP1Q9Y3L3 701 aa17.91■□□□□ 0.46
DDX39A-206ENST00000587730 CARNS1A5YM72 827 aa17.9■□□□□ 0.46
DDX39A-206ENST00000587730 ZNF197O14709 1029 aa17.9■□□□□ 0.46
DDX39A-206ENST00000587730 PRAMEF4O60810 478 aa17.9■□□□□ 0.46
DDX39A-206ENST00000587730 SRCP12931 536 aa17.9■□□□□ 0.46
DDX39A-206ENST00000587730 ELNP15502 786 aa17.9■□□□□ 0.46
DDX39A-206ENST00000587730 GKP32189 559 aa17.9■□□□□ 0.46
DDX39A-206ENST00000587730 DOC2AQ14183 400 aa17.9■□□□□ 0.46
DDX39A-206ENST00000587730 MICAQ29983 383 aa17.9■□□□□ 0.46
DDX39A-206ENST00000587730 TPRG1LQ5T0D9 272 aa17.9■□□□□ 0.46
DDX39A-206ENST00000587730 PRAMEF9Q5VWM5 478 aa17.9■□□□□ 0.46
DDX39A-206ENST00000587730 GPR153Q6NV75 609 aa17.9■□□□□ 0.46
DDX39A-206ENST00000587730 C22orf39Q6P5X5 142 aa17.9■□□□□ 0.46
DDX39A-206ENST00000587730 TRIM40Q6P9F5 258 aa17.9■□□□□ 0.46
DDX39A-206ENST00000587730 TMEM150AQ86TG1 271 aa17.9■□□□□ 0.46
DDX39A-206ENST00000587730 FAM124AQ86V42 546 aa17.9■□□□□ 0.46
DDX39A-206ENST00000587730 NLRP8Q86W28 1048 aa17.9■□□□□ 0.46
DDX39A-206ENST00000587730 SPPL2AQ8TCT8 520 aa17.9■□□□□ 0.46
DDX39A-206ENST00000587730 ELMO1Q92556 727 aa17.9■□□□□ 0.46
DDX39A-206ENST00000587730 FEVQ99581 238 aa17.9■□□□□ 0.46
DDX39A-206ENST00000587730 ALOXE3Q9BYJ1 711 aa17.9■□□□□ 0.46
DDX39A-206ENST00000587730 IMPAD1Q9NX62 359 aa17.9■□□□□ 0.46
DDX39A-206ENST00000587730 GABRR3A8MPY1 467 aa17.89■□□□□ 0.45
DDX39A-206ENST00000587730 LOC110117498-PIK3R3F6TDL0 507 aa17.89■□□□□ 0.45
DDX39A-206ENST00000587730 M0R082 166 aa17.89■□□□□ 0.45
DDX39A-206ENST00000587730 C1SP09871 688 aa17.89■□□□□ 0.45
DDX39A-206ENST00000587730 TIA1P31483 386 aaKnown RBP eCLIP17.89■□□□□ 0.45
DDX39A-206ENST00000587730 SLC7A9P82251 487 aa17.89■□□□□ 0.45
DDX39A-206ENST00000587730 E2F2Q14209 437 aa17.89■□□□□ 0.45
DDX39A-206ENST00000587730 NDUFA5Q16718 116 aa17.89■□□□□ 0.45
DDX39A-206ENST00000587730 GCNT6Q5T4J0 391 aa17.89■□□□□ 0.45
DDX39A-206ENST00000587730 PRR23CQ6ZRP0 262 aa17.89■□□□□ 0.45
DDX39A-206ENST00000587730 AKAP14Q86UN6 197 aa17.89■□□□□ 0.45
DDX39A-206ENST00000587730 ARL14EPQ8N8R7 260 aaPredicted RBP17.89■□□□□ 0.45
DDX39A-206ENST00000587730 ZNF557Q8N988 423 aaPredicted RBP17.89■□□□□ 0.45
DDX39A-206ENST00000587730 GALNT6Q8NCL4 622 aa17.89■□□□□ 0.45
DDX39A-206ENST00000587730 OR52N2Q8NGI0 321 aa17.89■□□□□ 0.45
DDX39A-206ENST00000587730 OR4A15Q8NGL6 344 aa17.89■□□□□ 0.45
DDX39A-206ENST00000587730 OR4C15Q8NGM1 316 aa17.89■□□□□ 0.45
DDX39A-206ENST00000587730 GEMIN6Q8WXD5 167 aaKnown RBP17.89■□□□□ 0.45
DDX39A-206ENST00000587730 PIK3R3Q92569 461 aa17.89■□□□□ 0.45
DDX39A-206ENST00000587730 GGHQ92820 318 aa17.89■□□□□ 0.45
DDX39A-206ENST00000587730 RHNO1Q9BSD3 238 aa17.89■□□□□ 0.45
DDX39A-206ENST00000587730 SGK2Q9HBY8 427 aa17.89■□□□□ 0.45
DDX39A-206ENST00000587730 AASSQ9UDR5 926 aa17.89■□□□□ 0.45
DDX39A-206ENST00000587730 SLC25A13Q9UJS0 675 aa17.89■□□□□ 0.45
DDX39A-206ENST00000587730 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.89■□□□□ 0.45
DDX39A-206ENST00000587730 CFL2Q9Y281 166 aa17.89■□□□□ 0.45
DDX39A-206ENST00000587730 TESMINQ9Y4I5 508 aa17.89■□□□□ 0.45
DDX39A-206ENST00000587730 PCDHGA2Q9Y5H1 932 aa17.89■□□□□ 0.45
DDX39A-206ENST00000587730 A8MX80 341 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 APOA1P02647 267 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 IDSP22304 550 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 LHCGRP22888 699 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 GADD45AP24522 165 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 HOXD12P35452 270 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 PCYT1AP49585 367 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 CDC42P60953 191 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 IRF3Q14653 427 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 ZNF630Q2M218 657 aaPredicted RBP17.88■□□□□ 0.45
DDX39A-206ENST00000587730 BRAT1Q6PJG6 821 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 VRK3Q8IV63 474 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 MRPS31Q92665 395 aaKnown RBP17.88■□□□□ 0.45
DDX39A-206ENST00000587730 SLC35B4Q969S0 331 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 KCNC2Q96PR1 638 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 YME1L1Q96TA2 773 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 HERC2P3Q9BVR0 1158 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 CDCA4Q9BXL8 241 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 ATG10Q9H0Y0 220 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 ZBTB20Q9HC78 741 aaPredicted RBP17.88■□□□□ 0.45
DDX39A-206ENST00000587730 ABCB10Q9NRK6 738 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 MRPL17Q9NRX2 175 aaKnown RBP17.88■□□□□ 0.45
DDX39A-206ENST00000587730 PCDHGA3Q9Y5H0 932 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 KIAA1671Q9BY89 1806 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 GRM6O15303 877 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 GPNMBQ14956 572 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 SYT16Q17RD7 645 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 SYTL3Q4VX76 610 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 CATSPEREQ5SY80 951 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 AGTRAPQ6RW13 159 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 SLC22A15Q8IZD6 547 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 SLC5A8Q8N695 610 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 C1orf52Q8N6N3 182 aaKnown RBP17.88■□□□□ 0.45
DDX39A-206ENST00000587730 POC5Q8NA72 575 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 CDC26Q8NHZ8 85 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 MTERF3Q96E29 417 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 FOPNLQ96NB1 174 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 MTERF1Q99551 399 aaKnown RBP17.88■□□□□ 0.45
DDX39A-206ENST00000587730 C6orf62Q9GZU0 229 aaPredicted RBP17.88■□□□□ 0.45
DDX39A-206ENST00000587730 SIAEQ9HAT2 523 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms