RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 C17orf64Q86WR6 236 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 SIAH3Q8IW03 269 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 LMNTD2Q8IXW0 634 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 CPNE9Q8IYJ1 553 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 GHDCQ8N2G8 530 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 ZCCHC10Q8TBK6 192 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 PEX11GQ96HA9 241 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 SPOCK3Q9BQ16 436 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 TRIM51Q9BSJ1 452 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 LANCL2Q9NS86 450 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 LRFN1Q9P244 771 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 ITGB1BP2Q9UKP3 347 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 NAALAD2Q9Y3Q0 740 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 INTS1Q8N201 2190 aaKnown RBP13.22□□□□□ -0.29
DNMT1-213ENST00000587604 AKAP9Q99996 3911 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 CDC123O75794 336 aaPredicted RBP13.21□□□□□ -0.29
DNMT1-213ENST00000587604 SLC35G6P0C7Q6 338 aa13.21□□□□□ -0.29
DNMT1-213ENST00000587604 ABOP16442 354 aa13.21□□□□□ -0.29
DNMT1-213ENST00000587604 CCND1P24385 295 aa13.21□□□□□ -0.29
DNMT1-213ENST00000587604 COILP38432 576 aaPredicted RBP13.21□□□□□ -0.29
DNMT1-213ENST00000587604 SLC1A2P43004 574 aa13.21□□□□□ -0.29
DNMT1-213ENST00000587604 VPS41P49754 854 aa13.21□□□□□ -0.29
DNMT1-213ENST00000587604 SLC26A5P58743 744 aa13.21□□□□□ -0.29
DNMT1-213ENST00000587604 GPS1Q13098 491 aa13.21□□□□□ -0.29
DNMT1-213ENST00000587604 HERC3Q15034 1050 aa13.21□□□□□ -0.29
DNMT1-213ENST00000587604 MAPKAPK3Q16644 382 aa13.21□□□□□ -0.29
DNMT1-213ENST00000587604 ANKRD22Q5VYY1 191 aa13.21□□□□□ -0.29
DNMT1-213ENST00000587604 LRRC8EQ6NSJ5 796 aa13.21□□□□□ -0.29
DNMT1-213ENST00000587604 AGTRAPQ6RW13 159 aa13.21□□□□□ -0.29
DNMT1-213ENST00000587604 RPS19BP1Q86WX3 136 aaKnown RBP13.21□□□□□ -0.29
DNMT1-213ENST00000587604 DOLPP1Q86YN1 238 aa13.21□□□□□ -0.29
DNMT1-213ENST00000587604 AFAP1L2Q8N4X5 818 aa13.21□□□□□ -0.29
DNMT1-213ENST00000587604 MFSD9Q8NBP5 474 aa13.21□□□□□ -0.29
DNMT1-213ENST00000587604 MCUQ8NE86 351 aa13.21□□□□□ -0.29
DNMT1-213ENST00000587604 CALML6Q8TD86 181 aa13.21□□□□□ -0.29
DNMT1-213ENST00000587604 ELP5Q8TE02 316 aa13.21□□□□□ -0.29
DNMT1-213ENST00000587604 PHF10Q8WUB8 498 aaKnown RBP13.21□□□□□ -0.29
DNMT1-213ENST00000587604 C14orf79Q96F83 325 aa13.21□□□□□ -0.29
DNMT1-213ENST00000587604 CDCP1Q9H5V8 836 aa13.21□□□□□ -0.29
DNMT1-213ENST00000587604 SH2B3Q9UQQ2 575 aa13.21□□□□□ -0.29
DNMT1-213ENST00000587604 PDE10AQ9Y233 779 aa13.21□□□□□ -0.29
DNMT1-213ENST00000587604 DNAJC13O75165 2243 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 E9PLN8 166 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 NDC80O14777 642 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 CEP104O60308 925 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 SLC25A12O75746 678 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 HAUS5O94927 633 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 C8GP07360 202 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 NPPBP16860 134 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 OR4D2P58180 307 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 MPP1Q00013 466 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 NAE1Q13564 534 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 UGT3A1Q6NUS8 523 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 LCTLQ6UWM7 567 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 CEP97Q8IW35 865 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 PALM2Q8IXS6 379 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 EID3Q8N140 333 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 SPC24Q8NBT2 197 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 OR5T3Q8NGG3 340 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 AGAP11Q8TF27 550 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 TSLPQ969D9 159 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 TBC1D20Q96BZ9 403 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 OLFM1Q99784 485 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 VKORC1Q9BQB6 163 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 AARSD1Q9BTE6 412 aaKnown RBP13.2□□□□□ -0.3
DNMT1-213ENST00000587604 SARGQ9BW04 601 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 SGPP1Q9BX95 441 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 RBCK1Q9BYM8 510 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 ATG10Q9H0Y0 220 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 PARVBQ9HBI1 364 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 XAB2Q9HCS7 855 aaKnown RBP13.2□□□□□ -0.3
DNMT1-213ENST00000587604 C20orf96Q9NUD7 363 aaPredicted RBP13.2□□□□□ -0.3
DNMT1-213ENST00000587604 ADAMTS6Q9UKP5 1117 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 FBXO5Q9UKT4 447 aa13.2□□□□□ -0.3
DNMT1-213ENST00000587604 ZNF860A6NHJ4 632 aa13.19□□□□□ -0.3
DNMT1-213ENST00000587604 PRRG2O14669 202 aa13.19□□□□□ -0.3
DNMT1-213ENST00000587604 SLC16A5O15375 505 aa13.19□□□□□ -0.3
DNMT1-213ENST00000587604 NME2P1O60361 137 aa13.19□□□□□ -0.3
DNMT1-213ENST00000587604 GALR3O60755 368 aaPredicted RBP13.19□□□□□ -0.3
DNMT1-213ENST00000587604 TSPAN12O95859 305 aa13.19□□□□□ -0.3
DNMT1-213ENST00000587604 KRT14P02533 472 aa13.19□□□□□ -0.3
DNMT1-213ENST00000587604 FHP07954 510 aa13.19□□□□□ -0.3
DNMT1-213ENST00000587604 CDH1P12830 882 aa13.19□□□□□ -0.3
DNMT1-213ENST00000587604 NME2P22392 152 aa13.19□□□□□ -0.3
DNMT1-213ENST00000587604 JAK1P23458 1154 aa13.19□□□□□ -0.3
DNMT1-213ENST00000587604 CDC25BP30305 580 aa13.19□□□□□ -0.3
DNMT1-213ENST00000587604 CYB561P49447 251 aa13.19□□□□□ -0.3
DNMT1-213ENST00000587604 RGS4P49798 205 aa13.19□□□□□ -0.3
DNMT1-213ENST00000587604 KRTAP10-9P60411 292 aa13.19□□□□□ -0.3
DNMT1-213ENST00000587604 SKP1P63208 163 aa13.19□□□□□ -0.3
DNMT1-213ENST00000587604 MEF2AQ02078 507 aaPredicted RBP13.19□□□□□ -0.3
DNMT1-213ENST00000587604 PWP1Q13610 501 aa13.19□□□□□ -0.3
DNMT1-213ENST00000587604 ZNF468Q5VIY5 522 aaPredicted RBP13.19□□□□□ -0.3
DNMT1-213ENST00000587604 NIPAL1Q6NVV3 410 aa13.19□□□□□ -0.3
DNMT1-213ENST00000587604 CHERPQ8IWX8 916 aaKnown RBP13.19□□□□□ -0.3
DNMT1-213ENST00000587604 ACBD4Q8NC06 268 aa13.19□□□□□ -0.3
DNMT1-213ENST00000587604 ABHD11Q8NFV4 315 aa13.19□□□□□ -0.3
DNMT1-213ENST00000587604 OR4K1Q8NGD4 311 aa13.19□□□□□ -0.3
DNMT1-213ENST00000587604 CHTF18Q8WVB6 975 aa13.19□□□□□ -0.3
DNMT1-213ENST00000587604 EEF1AKMT1Q8WVE0 214 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms