RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 VEGFDO43915 354 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 SORBS2O94875 1100 aaKnown RBP7.52□□□□□ -1.21
VMP1-204ENST00000587259 ESRRBO95718 433 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 OTCP00480 354 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 ENO1P06733 434 aaKnown RBP7.52□□□□□ -1.21
VMP1-204ENST00000587259 ANXA5P08758 320 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 CCNYL3P0C7X3 344 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 FGF5P12034 268 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 MTHFD2P13995 350 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 NQO1P15559 274 aaKnown RBP7.52□□□□□ -1.21
VMP1-204ENST00000587259 XRCC1P18887 633 aaPredicted RBP7.52□□□□□ -1.21
VMP1-204ENST00000587259 CYP2A7P20853 494 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 EEF1DP29692 281 aaKnown RBP7.52□□□□□ -1.21
VMP1-204ENST00000587259 PBLDP30039 288 aaPredicted RBP7.52□□□□□ -1.21
VMP1-204ENST00000587259 CAPZBP47756 277 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 PRLHRP49683 370 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 ATP4BP51164 291 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 PGDP52209 483 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 FOXL2P58012 376 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 STX1BP61266 288 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 CLCQ05315 142 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 SF3A3Q12874 501 aaKnown RBP eCLIP7.52□□□□□ -1.21
VMP1-204ENST00000587259 HERC3Q15034 1050 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 PCBP2Q15366 365 aaKnown RBP eCLIP7.52□□□□□ -1.21
VMP1-204ENST00000587259 INPP5JQ15735 1006 aaPredicted RBP7.52□□□□□ -1.21
VMP1-204ENST00000587259 SYTL3Q4VX76 610 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 CRTC2Q53ET0 693 aaPredicted RBP7.52□□□□□ -1.21
VMP1-204ENST00000587259 DUS1LQ6P1R4 473 aaKnown RBP7.52□□□□□ -1.21
VMP1-204ENST00000587259 SBSNQ6UWP8 590 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 FAM83HQ6ZRV2 1179 aaPredicted RBP7.52□□□□□ -1.21
VMP1-204ENST00000587259 PPP1R3BQ86XI6 285 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 TMEM151BQ8IW70 566 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 SPATA6LQ8N4H0 392 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 GALNT11Q8NCW6 608 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 GIMAP7Q8NHV1 300 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 ZNF483Q8TF39 744 aaPredicted RBP7.52□□□□□ -1.21
VMP1-204ENST00000587259 EEF1AKMT1Q8WVE0 214 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 ATL1Q8WXF7 558 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 KLHL6Q8WZ60 621 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 MCUR1Q96AQ8 359 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 FOPNLQ96NB1 174 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 ZNF382Q96SR6 550 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 MAP3K3Q99759 626 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 BTBD10Q9BSF8 475 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 SLC25A23Q9BV35 468 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 ING2Q9H160 280 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 MEAF6Q9HAF1 191 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 SLC40A1Q9NP59 571 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 TMEM45AQ9NWC5 275 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 FAM8A1Q9UBU6 413 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 PADI1Q9ULC6 663 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 TRAF6Q9Y4K3 522 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 CELSR2Q9HCU4 2923 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 ESPL1Q14674 2120 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 CRYBG3Q68DQ2 2970 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 LRBAP50851 2863 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 CDC7O00311 574 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 LIN7AO14910 233 aaPredicted RBP7.51□□□□□ -1.21
VMP1-204ENST00000587259 AZIN1O14977 448 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 CHUKO15111 745 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 UROSP10746 265 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 SLC2A4P14672 509 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 NELFEP18615 380 aaKnown RBP7.51□□□□□ -1.21
VMP1-204ENST00000587259 UGT1A6P19224 532 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 NCF2P19878 526 aaPredicted RBP7.51□□□□□ -1.21
VMP1-204ENST00000587259 UGT1A1P22309 533 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 UGT1A4P22310 534 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 AOAHP28039 575 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 ARRB2P32121 409 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 GMPRP36959 345 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 DCTP40126 519 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 MXRA7P84157 204 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 RIPK1Q13546 671 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 SQLEQ14534 574 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 GBX1Q14549 363 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 IL11RAQ14626 422 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 NR6A1Q15406 480 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 RBBP7Q16576 425 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 PPP1R3AQ16821 1122 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 UGT8Q16880 541 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 BCL7AQ4VC05 210 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 UNC50Q53HI1 259 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 C6orf163Q5TEZ5 329 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 KANK2Q63ZY3 851 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 JMJD6Q6NYC1 403 aaPredicted RBP7.51□□□□□ -1.21
VMP1-204ENST00000587259 RNF165Q6ZSG1 346 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 GPRIN3Q6ZVF9 776 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 LRRC70Q7Z2Q7 622 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 PRSS42Q7Z5A4 293 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 C11orf96Q7Z7L8 435 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 LRRTM4Q86VH4 590 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 TRAPPC5Q8IUR0 188 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 APLFQ8IW19 511 aaPredicted RBP7.51□□□□□ -1.21
VMP1-204ENST00000587259 C10orf67Q8IYJ2 551 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 CPSF7Q8N684 471 aaKnown RBP7.51□□□□□ -1.21
VMP1-204ENST00000587259 FDCSPQ8NFU4 85 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 AGR3Q8TD06 166 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 MAGEC3Q8TD91 643 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 AGAP11Q8TF27 550 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 MR1Q95460 341 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms