RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 SERPINB4P48594 390 aa18.24■□□□□ 0.51
DDX39A-204ENST00000586558 STXBP1P61764 594 aaKnown RBP18.24■□□□□ 0.51
DDX39A-204ENST00000586558 CYP4F2P78329 520 aa18.24■□□□□ 0.51
DDX39A-204ENST00000586558 DCDP81605 110 aaKnown RBP18.24■□□□□ 0.51
DDX39A-204ENST00000586558 CLN3Q13286 438 aa18.24■□□□□ 0.51
DDX39A-204ENST00000586558 NIPAL1Q6NVV3 410 aa18.24■□□□□ 0.51
DDX39A-204ENST00000586558 GPRIN3Q6ZVF9 776 aa18.24■□□□□ 0.51
DDX39A-204ENST00000586558 RPS27LQ71UM5 84 aaKnown RBP18.24■□□□□ 0.51
DDX39A-204ENST00000586558 IL22RA1Q8N6P7 574 aa18.24■□□□□ 0.51
DDX39A-204ENST00000586558 OR4F6Q8NGB9 312 aa18.24■□□□□ 0.51
DDX39A-204ENST00000586558 MR1Q95460 341 aa18.24■□□□□ 0.51
DDX39A-204ENST00000586558 ARL8AQ96BM9 186 aa18.24■□□□□ 0.51
DDX39A-204ENST00000586558 SLC6A16Q9GZN6 736 aa18.24■□□□□ 0.51
DDX39A-204ENST00000586558 NDOR1Q9UHB4 597 aa18.24■□□□□ 0.51
DDX39A-204ENST00000586558 TRPS1Q9UHF7 1281 aa18.24■□□□□ 0.51
DDX39A-204ENST00000586558 ACACAQ13085 2346 aa18.24■□□□□ 0.51
DDX39A-204ENST00000586558 TMEM120BA0PK00 339 aa18.23■□□□□ 0.51
DDX39A-204ENST00000586558 HMGB1P1B2RPK0 211 aaPredicted RBP18.23■□□□□ 0.51
DDX39A-204ENST00000586558 C21orf140B9A014 251 aa18.23■□□□□ 0.51
DDX39A-204ENST00000586558 ONECUT2O95948 504 aa18.23■□□□□ 0.51
DDX39A-204ENST00000586558 STATHP02808 62 aa18.23■□□□□ 0.51
DDX39A-204ENST00000586558 DHRS4L1P0CG22 281 aa18.23■□□□□ 0.51
DDX39A-204ENST00000586558 PIM1P11309 404 aaPredicted RBP18.23■□□□□ 0.51
DDX39A-204ENST00000586558 SKP1P63208 163 aa18.23■□□□□ 0.51
DDX39A-204ENST00000586558 PHEXP78562 749 aa18.23■□□□□ 0.51
DDX39A-204ENST00000586558 MPP2Q14168 576 aa18.23■□□□□ 0.51
DDX39A-204ENST00000586558 HERC3Q15034 1050 aa18.23■□□□□ 0.51
DDX39A-204ENST00000586558 ZRSR2Q15696 482 aaKnown RBP18.23■□□□□ 0.51
DDX39A-204ENST00000586558 CPSF6Q16630 551 aaKnown RBP eCLIP18.23■□□□□ 0.51
DDX39A-204ENST00000586558 NKAIN1Q4KMZ8 207 aa18.23■□□□□ 0.51
DDX39A-204ENST00000586558 C1orf189Q5VU69 101 aa18.23■□□□□ 0.51
DDX39A-204ENST00000586558 ABHD13Q7L211 337 aa18.23■□□□□ 0.51
DDX39A-204ENST00000586558 KCT2Q8NC54 265 aa18.23■□□□□ 0.51
DDX39A-204ENST00000586558 KIAA1143Q96AT1 154 aaPredicted RBP18.23■□□□□ 0.51
DDX39A-204ENST00000586558 MOCOSQ96EN8 888 aa18.23■□□□□ 0.51
DDX39A-204ENST00000586558 RNF31Q96EP0 1072 aa18.23■□□□□ 0.51
DDX39A-204ENST00000586558 CDK15Q96Q40 435 aa18.23■□□□□ 0.51
DDX39A-204ENST00000586558 EFHD1Q9BUP0 239 aa18.23■□□□□ 0.51
DDX39A-204ENST00000586558 SLC29A3Q9BZD2 475 aa18.23■□□□□ 0.51
DDX39A-204ENST00000586558 ZNF446Q9NWS9 450 aa18.23■□□□□ 0.51
DDX39A-204ENST00000586558 RAXQ9Y2V3 346 aa18.23■□□□□ 0.51
DDX39A-204ENST00000586558 FRYQ5TBA9 3013 aa18.23■□□□□ 0.51
DDX39A-204ENST00000586558 C9J4A7 227 aa18.22■□□□□ 0.51
DDX39A-204ENST00000586558 ESRRBO95718 433 aa18.22■□□□□ 0.51
DDX39A-204ENST00000586558 ENO1P06733 434 aaKnown RBP18.22■□□□□ 0.51
DDX39A-204ENST00000586558 PCNAP12004 261 aa18.22■□□□□ 0.51
DDX39A-204ENST00000586558 TSPAN8P19075 237 aa18.22■□□□□ 0.51
DDX39A-204ENST00000586558 SERPINB5P36952 375 aa18.22■□□□□ 0.51
DDX39A-204ENST00000586558 TGIF1Q15583 401 aa18.22■□□□□ 0.51
DDX39A-204ENST00000586558 ADPRMQ3LIE5 342 aa18.22■□□□□ 0.51
DDX39A-204ENST00000586558 FRG2Q64ET8 278 aa18.22■□□□□ 0.51
DDX39A-204ENST00000586558 LETMD1Q6P1Q0 360 aa18.22■□□□□ 0.51
DDX39A-204ENST00000586558 VN1R5Q7Z5H4 357 aa18.22■□□□□ 0.51
DDX39A-204ENST00000586558 AFAP1L2Q8N4X5 818 aa18.22■□□□□ 0.51
DDX39A-204ENST00000586558 ZNF473Q8WTR7 871 aaKnown RBP18.22■□□□□ 0.51
DDX39A-204ENST00000586558 CCT6BQ92526 530 aa18.22■□□□□ 0.51
DDX39A-204ENST00000586558 GAL3ST3Q96A11 431 aa18.22■□□□□ 0.51
DDX39A-204ENST00000586558 FKBP10Q96AY3 582 aa18.22■□□□□ 0.51
DDX39A-204ENST00000586558 CNDP1Q96KN2 507 aa18.22■□□□□ 0.51
DDX39A-204ENST00000586558 FRG2BQ96QU4 278 aa18.22■□□□□ 0.51
DDX39A-204ENST00000586558 MACROD1Q9BQ69 325 aa18.22■□□□□ 0.51
DDX39A-204ENST00000586558 MECRQ9BV79 373 aa18.22■□□□□ 0.51
DDX39A-204ENST00000586558 GATA5Q9BWX5 397 aaPredicted RBP18.22■□□□□ 0.51
DDX39A-204ENST00000586558 CHST8Q9H2A9 424 aa18.22■□□□□ 0.51
DDX39A-204ENST00000586558 ANKHQ9HCJ1 492 aa18.22■□□□□ 0.51
DDX39A-204ENST00000586558 ACSS2Q9NR19 701 aa18.22■□□□□ 0.51
DDX39A-204ENST00000586558 NKIRAS1Q9NYS0 192 aa18.22■□□□□ 0.51
DDX39A-204ENST00000586558 PPT2Q9UMR5 302 aa18.22■□□□□ 0.51
DDX39A-204ENST00000586558 FREM2Q5SZK8 3169 aa18.22■□□□□ 0.51
DDX39A-204ENST00000586558 TPRP12270 2363 aaKnown RBP18.22■□□□□ 0.51
DDX39A-204ENST00000586558 ANKRD11Q6UB99 2663 aaPredicted RBP18.21■□□□□ 0.51
DDX39A-204ENST00000586558 A0A087WV48 116 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 LRIT2A6NDA9 550 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 FOXE1O00358 373 aaPredicted RBP18.21■□□□□ 0.51
DDX39A-204ENST00000586558 PPP6CO00743 305 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 KLK10O43240 276 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 NPHS1O60500 1241 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 MED26O95402 600 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 NSA2O95478 260 aaKnown RBP18.21■□□□□ 0.51
DDX39A-204ENST00000586558 CD63P08962 238 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 RAB40ALP0C0E4 278 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 ALOX12P18054 663 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 AVPR1BP47901 424 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 HYAL2Q12891 473 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 IFT88Q13099 833 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 DSG2Q14126 1118 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 TMEM35AQ53FP2 167 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 TTMPQ5BVD1 217 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 HHATQ5VTY9 493 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 TTC19Q6DKK2 380 aaPredicted RBP18.21■□□□□ 0.51
DDX39A-204ENST00000586558 LRRC69Q6ZNQ3 347 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 SYVN1Q86TM6 617 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 NUDCD3Q8IVD9 361 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 HOMEZQ8IX15 550 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 HUS1BQ8NHY5 278 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 AGAP11Q8TF27 550 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 CT55Q8WUE5 264 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 CMTM7Q96FZ5 175 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 NAF1Q96HR8 494 aaKnown RBP18.21■□□□□ 0.51
DDX39A-204ENST00000586558 MS4A8Q9BY19 250 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms