RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 ELOVL7A1L3X0 281 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 ASLP04424 464 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 IDSP22304 550 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 NUDT6P53370 316 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 EMX2Q04743 252 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 UBE3AQ05086 875 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 LYPLAL1Q5VWZ2 237 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 Q6ZSR6 202 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 METTL3Q86U44 580 aaKnown RBP9.88□□□□□ -0.83
RFFL-212ENST00000584655 PDPRQ8NCN5 879 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 OR13H1Q8NG92 308 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 SLC5A11Q8WWX8 675 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 FAM3CQ92520 227 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 GTF2H4Q92759 462 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 PEX13Q92968 403 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 MRGPRX1Q96LB2 322 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 ASB2Q96Q27 587 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 GDE1Q9NZC3 331 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 FZD4Q9ULV1 537 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 PRPF19Q9UMS4 504 aaKnown RBP9.88□□□□□ -0.83
RFFL-212ENST00000584655 J3KTA2 159 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 ACOT8O14734 319 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 NTN1O95631 604 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 FGF19O95750 216 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 FGF4P08620 206 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 RYKP34925 604 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 SLC26A3P40879 764 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 EPHA5P54756 1037 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 BTN3A2P78410 334 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 ZNF385BQ569K4 471 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 HMBOX1Q6NT76 420 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 GPR153Q6NV75 609 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 ZFAND4Q86XD8 727 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 TDHQ8IZJ6 230 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 SIMC1Q8NDZ2 872 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 OR2I1PQ8NGU4 316 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 SP7Q8TDD2 431 aaPredicted RBP9.87□□□□□ -0.83
RFFL-212ENST00000584655 SLC9A6Q92581 669 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 ZDHHC5Q9C0B5 715 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 BCAP29Q9UHQ4 241 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 ERVK-11Q9UQG0 969 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 DNAJB6O75190 326 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 WISP3O95389 354 aaPredicted RBP9.87□□□□□ -0.83
RFFL-212ENST00000584655 CD9P21926 228 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 LTBRP36941 435 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 IL5RAQ01344 420 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 RCAN2Q14206 197 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 DEF8Q6ZN54 512 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 SPATA19Q7Z5L4 167 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 FAM217AQ8IXS0 508 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 TMBIM1Q969X1 311 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 OTUB2Q96DC9 234 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 BBS4Q96RK4 519 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 LMAN1LQ9HAT1 526 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 TPT1P8Q9HAU6 139 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 THAP10Q9P2Z0 257 aaPredicted RBP9.87□□□□□ -0.83
RFFL-212ENST00000584655 NPIPA5A0A0B4J1W7 369 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 MAGEA13PA6NCF6 341 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 NPIPA7E9PJI5 369 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 SOX14O95416 240 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 CTSBP07858 339 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 NPIPA8P0DM63 369 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 AMD1P17707 334 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 CSNK1EP49674 416 aaKnown RBP9.87□□□□□ -0.83
RFFL-212ENST00000584655 TPMTP51580 245 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 ADPRHP54922 357 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 RHDQ02161 417 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 NKG7Q16617 165 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 CYP2A13Q16696 494 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 DEFB133Q30KQ1 61 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 NKAIN2Q5VXU1 208 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 FAM92BQ6ZTR7 304 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 HORMAD1Q86X24 394 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 KLHDC8BQ8IXV7 354 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 SLC44A3Q8N4M1 653 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 DDHD1Q8NEL9 900 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 NFKBIDQ8NI38 313 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 WFIKKN2Q8TEU8 576 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 NECAB3Q96P71 396 aaPredicted RBP9.87□□□□□ -0.83
RFFL-212ENST00000584655 C1orf21Q9H246 121 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 SRMSQ9H3Y6 488 aa9.87□□□□□ -0.83
RFFL-212ENST00000584655 TRBV5-4A0A0C4DH59 114 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 M0QX08 132 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 IL9P15248 144 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 TCF3P15923 654 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 IGFALSP35858 605 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 HBA1P69905 142 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 GAB1Q13480 694 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 LASP1Q14847 261 aaKnown RBP9.86□□□□□ -0.83
RFFL-212ENST00000584655 GSTA3Q16772 222 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 UGT8Q16880 541 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 POMZP3Q6PJE2 187 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 PSD4Q8NDX1 1056 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 OR52E1Q8NGJ3 308 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 SLC47A1Q96FL8 570 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 ANKRD27Q96NW4 1050 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 TRIT1Q9H3H1 467 aaKnown RBP9.86□□□□□ -0.83
RFFL-212ENST00000584655 MAU2Q9Y6X3 613 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 PLXNA4Q9HCM2 1894 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 C5orf58C9J3I9 102 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms