RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 KCT2Q8NC54 265 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 OR5K1Q8NHB7 308 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 TSPEARQ8WU66 669 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 KAT2AQ92830 837 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 ARRDC3Q96B67 414 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 COL21A1Q96P44 957 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 ANKRD60Q9BZ19 345 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 CUEDC1Q9NWM3 386 aaPredicted RBP10.88□□□□□ -0.67
TOP3A-217ENST00000584582 FAM118AQ9NWS6 357 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 PI15O43692 258 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 NUAK1O60285 661 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 NADKO95544 446 aaPredicted RBP10.87□□□□□ -0.67
TOP3A-217ENST00000584582 ELAVL3Q14576 367 aaKnown RBP10.87□□□□□ -0.67
TOP3A-217ENST00000584582 NPTX1Q15818 432 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 RUNDC3AQ59EK9 446 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 RPS26P11Q5JNZ5 115 aaPredicted RBP10.87□□□□□ -0.67
TOP3A-217ENST00000584582 ANXA8L1Q5VT79 327 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 FAM46CQ5VWP2 391 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 EGFLAMQ63HQ2 1017 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 ZNF548Q8NEK5 533 aaPredicted RBP10.87□□□□□ -0.67
TOP3A-217ENST00000584582 STON2Q8WXE9 905 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 LRRC3BQ96PB8 259 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 BARD1Q99728 777 aaKnown RBP10.87□□□□□ -0.67
TOP3A-217ENST00000584582 MUC13Q9H3R2 512 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 ABCD2Q9UBJ2 740 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 SEC14L3Q9UDX4 400 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 ZFC3H1O60293 1989 aaKnown RBP10.87□□□□□ -0.67
TOP3A-217ENST00000584582 A0A096LPI6 279 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 LINC01553A4QN01 128 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 ERI3O43414 337 aaKnown RBP10.87□□□□□ -0.67
TOP3A-217ENST00000584582 APODP05090 189 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 IL12RB1P42701 662 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 GRIK2Q13002 908 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 TMEM236Q5W0B7 351 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 ZNF852Q6ZMS4 543 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 WDR53Q7Z5U6 358 aaPredicted RBP10.87□□□□□ -0.67
TOP3A-217ENST00000584582 NLGN4XQ8N0W4 816 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 DEFB119Q8N690 84 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 SETD9Q8NE22 299 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 OCEL1Q9H607 264 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 CLMPQ9H6B4 373 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 KAT8Q9H7Z6 458 aaKnown RBP10.87□□□□□ -0.67
TOP3A-217ENST00000584582 ZCCHC3Q9NUD5 404 aaKnown RBP10.87□□□□□ -0.67
TOP3A-217ENST00000584582 GALNT8Q9NY28 637 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 ERVK-18Q9QC07 812 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 NDRG2Q9UN36 371 aaKnown RBP10.87□□□□□ -0.67
TOP3A-217ENST00000584582 PIPSLA2A3N6 862 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 SMIM30A4D0T7 59 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 CCNDBP1O95273 360 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 CSRP3P50461 194 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 ST13P50502 369 aaKnown RBP10.87□□□□□ -0.67
TOP3A-217ENST00000584582 CLDN2P57739 230 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 HPCAP84074 193 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 VLDLRP98155 873 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 UGT8Q16880 541 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 ENPP7Q6UWV6 458 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 PARGQ86W56 976 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 LSRQ86X29 649 aaPredicted RBP10.87□□□□□ -0.67
TOP3A-217ENST00000584582 CARM1Q86X55 608 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 ZNF761Q86XN6 746 aaPredicted RBP10.87□□□□□ -0.67
TOP3A-217ENST00000584582 SLC9A6Q92581 669 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 CEP295NLQ96MC4 621 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 KCNK12Q9HB15 430 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 TMPRSS11EQ9UL52 423 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 SCN5AQ14524 2016 aa10.87□□□□□ -0.67
TOP3A-217ENST00000584582 PRAMEF33A0A0G2JMD5 474 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 EDDM13A0A1B0GTR0 161 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 PRKRAO75569 313 aaKnown RBP10.86□□□□□ -0.67
TOP3A-217ENST00000584582 INMTO95050 263 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 C1GALT1C1LP0DN25 315 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 ACTR1BP42025 376 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 PNLIPRP1P54315 467 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 ACTR1AP61163 376 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 NKX3-2P78367 333 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 CDK6Q00534 326 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 ZNF763Q0D2J5 394 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 TRIM16LQ309B1 348 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 PIWIL3Q7Z3Z3 882 aaKnown RBP10.86□□□□□ -0.67
TOP3A-217ENST00000584582 LRRTM4Q86VH4 590 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 GALNT13Q8IUC8 556 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 CACTIN-AS1Q8N1I8 211 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 FRMD1Q8N878 549 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 VN1R2Q8NFZ6 395 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 GIPC3Q8TF64 312 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 CXorf40BQ96DE9 158 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 CPEB1Q9BZB8 566 aaKnown RBP10.86□□□□□ -0.67
TOP3A-217ENST00000584582 PHPT1Q9NRX4 125 aaPredicted RBP10.86□□□□□ -0.67
TOP3A-217ENST00000584582 RAD18Q9NS91 495 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 USE1Q9NZ43 259 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 KLHL3Q9UH77 587 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 PLEKHM1Q9Y4G2 1056 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 MICAL3Q7RTP6 2002 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 FAM186AA6NE01 2351 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 OTOL1A6NHN0 477 aaPredicted RBP10.86□□□□□ -0.67
TOP3A-217ENST00000584582 TIA1P31483 386 aaKnown RBP eCLIP10.86□□□□□ -0.67
TOP3A-217ENST00000584582 CLCN2P51788 898 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 VBP1P61758 197 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 HBA1P69905 142 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 NR1D2Q14995 579 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 ZBED5Q49AG3 693 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms