RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 PARVBQ9HBI1 364 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 ZBTB20Q9HC78 741 aaPredicted RBP10.54□□□□□ -0.72
CCDC47-206ENST00000584112 PPANQ9NQ55 473 aaKnown RBP10.54□□□□□ -0.72
CCDC47-206ENST00000584112 STOX2Q9P2F5 926 aaPredicted RBP10.54□□□□□ -0.72
CCDC47-206ENST00000584112 PDE10AQ9Y233 779 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 CSAG2Q9Y5P2 127 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 HRNRQ86YZ3 2850 aaPredicted RBP10.54□□□□□ -0.72
CCDC47-206ENST00000584112 KCNE1BA0A087WTH5 132 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 A0A0A6YYC8 382 aaPredicted RBP10.53□□□□□ -0.72
CCDC47-206ENST00000584112 A0A1W2PQ72 361 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 H0YIG0 161 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 H7BY64 318 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 I3L1I5 382 aaPredicted RBP10.53□□□□□ -0.72
CCDC47-206ENST00000584112 BANF1O75531 89 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 AHSGP02765 367 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 HEXBP07686 556 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 CYC1P08574 325 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 IVDP26440 423 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 AP1S2P56377 157 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 IL2P60568 153 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 TIAL1Q01085 375 aaKnown RBP eCLIP10.53□□□□□ -0.72
CCDC47-206ENST00000584112 DR1Q01658 176 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 FOLH1Q04609 750 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 GTF3C1Q12789 2109 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 HIF1AQ16665 826 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 MSS51Q4VC12 460 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 RBM20Q5T481 1227 aaKnown RBP10.53□□□□□ -0.72
CCDC47-206ENST00000584112 B3GNTL1Q67FW5 361 aaPredicted RBP10.53□□□□□ -0.72
CCDC47-206ENST00000584112 XKRXQ6PP77 449 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 AGTRAPQ6RW13 159 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 PAQR3Q6TCH7 311 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 ISLR2Q6UXK2 745 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 NDUFAF7Q7L592 441 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 AMER3Q8N944 861 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 ACBD4Q8NC06 268 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 CAMKVQ8NCB2 501 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 DNAJB14Q8TBM8 379 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 LINGO1Q96FE5 620 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 CAPZA3Q96KX2 299 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 PRAP1Q96NZ9 151 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 LMF1Q96S06 567 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 HAUS8Q9BT25 410 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 TRIM54Q9BYV2 358 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 ZNF160Q9HCG1 818 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 RIC8BQ9NVN3 520 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 ADAMTS6Q9UKP5 1117 aa10.53□□□□□ -0.72
CCDC47-206ENST00000584112 NOVA2Q9UNW9 492 aaKnown RBP10.53□□□□□ -0.72
CCDC47-206ENST00000584112 CHD3Q12873 2000 aaKnown RBP10.53□□□□□ -0.72
CCDC47-206ENST00000584112 CCDC188H7C350 402 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 NDC80O14777 642 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 P2RX6O15547 441 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 FOXS1O43638 330 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 JRKO75564 520 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 NSA2O95478 260 aaKnown RBP10.52□□□□□ -0.73
CCDC47-206ENST00000584112 UQCRHP07919 91 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 COX6A1P12074 109 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 GABRB3P28472 473 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 ELK3P41970 407 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 TSFMP43897 325 aaKnown RBP10.52□□□□□ -0.73
CCDC47-206ENST00000584112 CDKN2DP55273 166 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 ARL4CP56559 192 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 GNG11P61952 73 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 MFAP5Q13361 173 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 NAE1Q13564 534 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 ZNF169Q14929 603 aaPredicted RBP10.52□□□□□ -0.73
CCDC47-206ENST00000584112 TLR1Q15399 786 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 TEDDM1Q5T9Z0 273 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 CAPN13Q6MZZ7 669 aaPredicted RBP10.52□□□□□ -0.73
CCDC47-206ENST00000584112 FAM45BPQ6NSW5 357 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 LCTLQ6UWM7 567 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 RIPOR1Q6ZS17 1223 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 LAPTM4BQ86VI4 370 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 PLD3Q8IV08 490 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 IGDCC3Q8IVU1 814 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 KLHL7Q8IXQ5 586 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 ARHGEF39Q8N4T4 335 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 GPATCH11Q8N954 259 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 FAM45AQ8TCE6 357 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 METTL21AQ8WXB1 218 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 ATL1Q8WXF7 558 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 C8orf44Q96CB5 159 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 CFAP36Q96G28 342 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 SNF8Q96H20 258 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 NAPGQ99747 312 aaPredicted RBP10.52□□□□□ -0.73
CCDC47-206ENST00000584112 SYNPO2LQ9H987 977 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 ARL15Q9NXU5 204 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 MKL2Q9ULH7 1088 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 CHMP2BQ9UQN3 213 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 PLEKHA6Q9Y2H5 1048 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 SAR1BQ9Y6B6 198 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 TEX264Q9Y6I9 313 aa10.52□□□□□ -0.73
CCDC47-206ENST00000584112 ANK3Q12955 4377 aaKnown RBP10.52□□□□□ -0.73
CCDC47-206ENST00000584112 IGHV1-45A0A0A0MS14 117 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 FFAR3O14843 346 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 GPR42O15529 346 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 BMP10O95393 424 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 CLDN14O95500 239 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 SERPINA7P05543 415 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 ENO2P09104 434 aaPredicted RBP10.51□□□□□ -0.73
CCDC47-206ENST00000584112 SLC35G6P0C7Q6 338 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms