RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 ERVK-11Q9UQG0 969 aa13.16□□□□□ -0.3
SRSF1-205ENST00000582730 KPNA4O00629 521 aaPredicted RBP13.16□□□□□ -0.3
SRSF1-205ENST00000582730 PCCBP05166 539 aa13.16□□□□□ -0.3
SRSF1-205ENST00000582730 NUDT7P0C024 238 aa13.16□□□□□ -0.3
SRSF1-205ENST00000582730 EN2P19622 333 aaPredicted RBP13.16□□□□□ -0.3
SRSF1-205ENST00000582730 IDUAP35475 653 aa13.16□□□□□ -0.3
SRSF1-205ENST00000582730 RAE1P78406 368 aaKnown RBP13.16□□□□□ -0.3
SRSF1-205ENST00000582730 VMACQ2NL98 169 aa13.16□□□□□ -0.3
SRSF1-205ENST00000582730 USP51Q70EK9 711 aa13.16□□□□□ -0.3
SRSF1-205ENST00000582730 SVOPLQ8N434 492 aa13.16□□□□□ -0.3
SRSF1-205ENST00000582730 TMCO5AQ8N6Q1 288 aa13.16□□□□□ -0.3
SRSF1-205ENST00000582730 OR9A1PQ8NGU1 263 aa13.16□□□□□ -0.3
SRSF1-205ENST00000582730 TRIM39Q9HCM9 518 aa13.16□□□□□ -0.3
SRSF1-205ENST00000582730 ABCG2Q9UNQ0 655 aa13.16□□□□□ -0.3
SRSF1-205ENST00000582730 RANBP2P49792 3224 aaKnown RBP13.16□□□□□ -0.3
SRSF1-205ENST00000582730 AQP9O43315 295 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 PRMT3O60678 531 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 SEC14L2O76054 403 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 OXSR1O95747 527 aaPredicted RBP13.15□□□□□ -0.3
SRSF1-205ENST00000582730 CYP4B1P13584 511 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 HOXB9P17482 250 aaPredicted RBP13.15□□□□□ -0.3
SRSF1-205ENST00000582730 OPRL1P41146 370 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 ASMTP46597 345 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 OXA1LQ15070 435 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 TTC23Q5W5X9 447 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 ZNF773Q6PK81 442 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 ERN2Q76MJ5 926 aaKnown RBP13.15□□□□□ -0.3
SRSF1-205ENST00000582730 THAP5Q7Z6K1 395 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 ZNF547Q8IVP9 402 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 PLA2G15Q8NCC3 412 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 OR4A15Q8NGL6 344 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 OR5K1Q8NHB7 308 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 HERVK_113Q902F9 699 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 SMARCD2Q92925 531 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 MAL2Q969L2 176 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 ASB16Q96NS5 453 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 YTHDF1Q9BYJ9 559 aaKnown RBP13.15□□□□□ -0.3
SRSF1-205ENST00000582730 LHPPQ9H008 270 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 IGFLR1Q9H665 355 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 BRF2Q9HAW0 419 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 FAM118AQ9NWS6 357 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 SPATA7Q9P0W8 599 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 SPASTQ9UBP0 616 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 FZD4Q9ULV1 537 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 NPIPB8E9PQR5 432 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 KCNK5O95279 499 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 HSD3B1P14060 373 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 NPPBP16860 134 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 HSD3B2P26439 372 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 TIA1P31483 386 aaKnown RBP eCLIP13.15□□□□□ -0.33e-7■■■■□ 24.3
SRSF1-205ENST00000582730 IL12RB1P42701 662 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 MAPK9P45984 424 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 PPP2R2BQ00005 443 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 HIST2H2ACQ16777 129 aaPredicted RBP13.15□□□□□ -0.3
SRSF1-205ENST00000582730 SPIN4Q56A73 249 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 PERM1Q5SV97 790 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 HIST2H2AA3Q6FI13 130 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 MSANTD1Q6ZTZ1 278 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 SERPINA11Q86U17 422 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 HORMAD1Q86X24 394 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 ZZZ3Q8IYH5 903 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 ZNF740Q8NDX6 193 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 ABHD11Q8NFV4 315 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 OR8J2Q8NGG1 315 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 RAB2BQ8WUD1 216 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 REPS1Q96D71 796 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 FAM129BQ96TA1 746 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 SPNS1Q9H2V7 528 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 MAGIXQ9H6Y5 334 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 CCDC177Q9NQR7 707 aaPredicted RBP13.15□□□□□ -0.3
SRSF1-205ENST00000582730 VNN3Q9NY84 501 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 RAPGEFL1Q9UHV5 662 aa13.15□□□□□ -0.3
SRSF1-205ENST00000582730 PIPSLA2A3N6 862 aa13.15□□□□□ -0.31
SRSF1-205ENST00000582730 PRR23AA6NEV1 266 aa13.15□□□□□ -0.31
SRSF1-205ENST00000582730 SCN2BO60939 215 aa13.15□□□□□ -0.31
SRSF1-205ENST00000582730 PCDH8O95206 1070 aa13.15□□□□□ -0.31
SRSF1-205ENST00000582730 HPRP00739 348 aa13.15□□□□□ -0.31
SRSF1-205ENST00000582730 ACPPP15309 386 aa13.15□□□□□ -0.31
SRSF1-205ENST00000582730 FSHRP23945 695 aa13.15□□□□□ -0.31
SRSF1-205ENST00000582730 MEP1AQ16819 746 aa13.15□□□□□ -0.31
SRSF1-205ENST00000582730 BCL7AQ4VC05 210 aa13.15□□□□□ -0.31
SRSF1-205ENST00000582730 PAGE2BQ5JRK9 111 aa13.15□□□□□ -0.31
SRSF1-205ENST00000582730 PDE12Q6L8Q7 609 aaKnown RBP13.15□□□□□ -0.31
SRSF1-205ENST00000582730 FAM83HQ6ZRV2 1179 aaPredicted RBP13.15□□□□□ -0.31
SRSF1-205ENST00000582730 NLRP8Q86W28 1048 aa13.15□□□□□ -0.31
SRSF1-205ENST00000582730 ARL10Q8N8L6 244 aa13.15□□□□□ -0.31
SRSF1-205ENST00000582730 TMIEQ8NEW7 156 aa13.15□□□□□ -0.31
SRSF1-205ENST00000582730 PHOSPHO2Q8TCD6 241 aa13.15□□□□□ -0.31
SRSF1-205ENST00000582730 STARD8Q92502 1023 aa13.15□□□□□ -0.31
SRSF1-205ENST00000582730 ALPK1Q96QP1 1244 aa13.15□□□□□ -0.31
SRSF1-205ENST00000582730 NRTNQ99748 197 aa13.15□□□□□ -0.31
SRSF1-205ENST00000582730 ASPSCR1Q9BZE9 553 aa13.15□□□□□ -0.31
SRSF1-205ENST00000582730 AMBRA1Q9C0C7 1298 aa13.15□□□□□ -0.31
SRSF1-205ENST00000582730 MTIF3Q9H2K0 278 aaKnown RBP13.15□□□□□ -0.31
SRSF1-205ENST00000582730 GPN2Q9H9Y4 310 aaPredicted RBP13.15□□□□□ -0.31
SRSF1-205ENST00000582730 SACM1LQ9NTJ5 587 aa13.15□□□□□ -0.31
SRSF1-205ENST00000582730 C3orf18Q9UK00 162 aa13.15□□□□□ -0.31
SRSF1-205ENST00000582730 PCDHGA8Q9Y5G5 932 aa13.15□□□□□ -0.31
SRSF1-205ENST00000582730 PCYT1BQ9Y5K3 369 aaPredicted RBP13.15□□□□□ -0.31
SRSF1-205ENST00000582730 SERTM1A2A2V5 107 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms