RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 SPRED1Q7Z699 444 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 PLXDC1Q8IUK5 500 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 LAS2Q8IYD9 372 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 AFAP1L2Q8N4X5 818 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 WDR48Q8TAF3 677 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 BAHD1Q8TBE0 780 aaPredicted RBP7.68□□□□□ -1.18
COPS3-215ENST00000578317 METTL6Q8TCB7 284 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 JPH3Q8WXH2 748 aaPredicted RBP7.68□□□□□ -1.18
COPS3-215ENST00000578317 RSC1A1Q92681 617 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 USP7Q93009 1102 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 CDC6Q99741 560 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 AIF1LQ9BQI0 150 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 PLCD4Q9BRC7 762 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 ACAT2Q9BWD1 397 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 ABCG4Q9H172 646 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 RHBGQ9H310 441 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 SEMA6CQ9H3T2 930 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 TNFRSF12AQ9NP84 129 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 MRPS30Q9NP92 439 aaKnown RBP7.68□□□□□ -1.18
COPS3-215ENST00000578317 PFDN4Q9NQP4 134 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 FGFR1OP2Q9NVK5 253 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 PNPOQ9NVS9 261 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 GEMIN8Q9NWZ8 242 aaKnown RBP7.68□□□□□ -1.18
COPS3-215ENST00000578317 KLHL3Q9UH77 587 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 ADGRE2Q9UHX3 823 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 BTBD3Q9Y2F9 522 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 DNAJC15Q9Y5T4 150 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 LRP4O75096 1905 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 PI4KAP42356 2102 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 RIF1Q5UIP0 2472 aaKnown RBP7.68□□□□□ -1.18
COPS3-215ENST00000578317 CFAP54Q96N23 3096 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 LOC100289279A0A1B0GTE1 492 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 CPED1A4D0V7 1026 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 GSAPA4D1B5 854 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 OR2A25A4D2G3 310 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 C4orf47A7E2U8 309 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 NPIPB8E9PQR5 432 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 H7BY64 318 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 FOXE1O00358 373 aaPredicted RBP7.67□□□□□ -1.18
COPS3-215ENST00000578317 TM4SF5O14894 197 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 DUX1O43812 170 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 SH3BP5O60239 455 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 DNAJA2O60884 412 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 ULK1O75385 1050 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 OR4F21O95013 312 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 FAM107AO95990 144 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 KRT6AP02538 564 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 C9P02748 559 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 KRT6BP04259 564 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 PGRP06401 933 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 CAPN1P07384 714 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 SERPINB1P30740 379 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 GRIA3P42263 894 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 PIK3CBP42338 1070 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 KRT6CP48668 564 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 INHBCP55103 352 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 FOXA1P55317 472 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 YBX1P67809 324 aaKnown RBP7.67□□□□□ -1.18
COPS3-215ENST00000578317 NHLH1Q02575 133 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 CFHR1Q03591 330 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 TSTA3Q13630 321 aaPredicted RBP7.67□□□□□ -1.18
COPS3-215ENST00000578317 HIST2H2ACQ16777 129 aaPredicted RBP7.67□□□□□ -1.18
COPS3-215ENST00000578317 KIAA1614Q5VZ46 1190 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 HIST2H2AA3Q6FI13 130 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 MED27Q6P2C8 311 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 TMEM71Q6P5X7 295 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 TMIGD1Q6UXZ0 262 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 FAM47EQ6ZV65 393 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 PIGWQ7Z7B1 504 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 CPLX4Q7Z7G2 160 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 GLRX5Q86SX6 157 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 PIP4P1Q86T03 277 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 TMPRSS11BQ86T26 416 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 ZNF761Q86XN6 746 aaPredicted RBP7.67□□□□□ -1.18
COPS3-215ENST00000578317 KRT78Q8N1N4 520 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 TTLQ8NG68 377 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 OR7G3Q8NG95 312 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 WDR20Q8TBZ3 569 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 REPS1Q96D71 796 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 AHCYL2Q96HN2 611 aaKnown RBP7.67□□□□□ -1.18
COPS3-215ENST00000578317 METTL2AQ96IZ6 378 aaKnown RBP7.67□□□□□ -1.18
COPS3-215ENST00000578317 CNDP2Q96KP4 475 aaKnown RBP7.67□□□□□ -1.18
COPS3-215ENST00000578317 PRAP1Q96NZ9 151 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 CCT8L2Q96SF2 557 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 DPH7Q9BTV6 452 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 NSRP1Q9H0G5 558 aaKnown RBP7.67□□□□□ -1.18
COPS3-215ENST00000578317 ENAMQ9NRM1 1142 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 ZNF490Q9ULM2 529 aaPredicted RBP7.67□□□□□ -1.18
COPS3-215ENST00000578317 SNX6Q9UNH7 406 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 SH2B3Q9UQQ2 575 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 SPEGQ15772 3267 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 ARID1BQ8NFD5 2236 aaPredicted RBP7.67□□□□□ -1.18
COPS3-215ENST00000578317 A0A0J9YY10 115 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 TRBC2A0A5B9 178 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 TLCD2A6NGC4 264 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 TRPC5OSA6NMA1 111 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 SNX3O60493 162 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 CRCPO75575 148 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 CPNE6O95741 557 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 CHEK2O96017 543 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms