RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 BNC2Q6ZN30 1099 aaPredicted RBP17.73■□□□□ 0.43
PRKCA-203ENST00000578063 SCUBE1Q8IWY4 988 aa17.73■□□□□ 0.43
PRKCA-203ENST00000578063 ULK2Q8IYT8 1036 aa17.73■□□□□ 0.43
PRKCA-203ENST00000578063 WDR48Q8TAF3 677 aa17.73■□□□□ 0.43
PRKCA-203ENST00000578063 BAHD1Q8TBE0 780 aaPredicted RBP17.73■□□□□ 0.43
PRKCA-203ENST00000578063 RGMAQ96B86 450 aa17.73■□□□□ 0.43
PRKCA-203ENST00000578063 DUSP23Q9BVJ7 150 aa17.73■□□□□ 0.43
PRKCA-203ENST00000578063 REXO4Q9GZR2 422 aaKnown RBP17.73■□□□□ 0.43
PRKCA-203ENST00000578063 NLGN3Q9NZ94 848 aa17.73■□□□□ 0.43
PRKCA-203ENST00000578063 ADAM29Q9UKF5 820 aa17.73■□□□□ 0.43
PRKCA-203ENST00000578063 CROTQ9UKG9 612 aa17.73■□□□□ 0.43
PRKCA-203ENST00000578063 MUC3AQ02505 3323 aa17.73■□□□□ 0.43
PRKCA-203ENST00000578063 LRIT2A6NDA9 550 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 NUDT21O43809 227 aaKnown RBP17.72■□□□□ 0.43
PRKCA-203ENST00000578063 NPPAP01160 153 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 PGRP06401 933 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 GIMD1P0DJR0 217 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 ALPPL2P10696 532 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 HPCAL1P37235 193 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 PSME3P61289 254 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 HLA-BQ31612 363 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 TRMT5Q32P41 509 aaKnown RBP17.72■□□□□ 0.43
PRKCA-203ENST00000578063 ADPRMQ3LIE5 342 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 SPANXN4Q5MJ08 99 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 FCRL6Q6DN72 434 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 PRMT9Q6P2P2 845 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 PRR23BQ6ZRT6 265 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 MSANTD1Q6ZTZ1 278 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 NUDT13Q86X67 352 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 DPP10Q8N608 796 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 EGLN2Q96KS0 407 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 SEMA6CQ9H3T2 930 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 CAPN10Q9HC96 672 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 EVA1BQ9NVM1 165 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 MAP10Q9P2G4 905 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 A0A088AWK7 358 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 CAPN5O15484 640 aaPredicted RBP17.72■□□□□ 0.43
PRKCA-203ENST00000578063 LRATO95237 230 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 KLK1P06870 262 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 HNRNPH1P31943 449 aaKnown RBP17.72■□□□□ 0.43
PRKCA-203ENST00000578063 S100A3P33764 101 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 BSGP35613 385 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 GSTM5P46439 218 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 LSSP48449 732 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 DGKQP52824 942 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 SRSF11Q05519 484 aaKnown RBP17.72■□□□□ 0.43
PRKCA-203ENST00000578063 PWP1Q13610 501 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 NFYCQ13952 458 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 CACNA1EQ15878 2313 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 ZCCHC8Q6NZY4 707 aaKnown RBP17.72■□□□□ 0.43
PRKCA-203ENST00000578063 C8orf82Q6P1X6 216 aaPredicted RBP17.72■□□□□ 0.43
PRKCA-203ENST00000578063 IKBIPQ70UQ0 350 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 KANSL1Q7Z3B3 1105 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 ZNF438Q7Z4V0 828 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 ASPGQ86U10 573 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 SLC35F3Q8IY50 421 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 SRFBP1Q8NEF9 429 aaKnown RBP17.72■□□□□ 0.43
PRKCA-203ENST00000578063 CDC26Q8NHZ8 85 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 HOPXQ9BPY8 73 aaPredicted RBP17.72■□□□□ 0.43
PRKCA-203ENST00000578063 ZFYVE21Q9BQ24 234 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 ZNF717Q9BY31 904 aaPredicted RBP17.72■□□□□ 0.43
PRKCA-203ENST00000578063 ABCG4Q9H172 646 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 EPB41L1Q9H4G0 881 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 MYNNQ9NPC7 610 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 LRIT1Q9P2V4 623 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 PILRAQ9UKJ1 303 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 WBP11Q9Y2W2 641 aaKnown RBP17.72■□□□□ 0.43
PRKCA-203ENST00000578063 PCDHGA7Q9Y5G6 932 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 RNF215Q9Y6U7 377 aa17.72■□□□□ 0.43
PRKCA-203ENST00000578063 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.72■□□□□ 0.43
PRKCA-203ENST00000578063 HEATR5BQ9P2D3 2071 aa17.71■□□□□ 0.43
PRKCA-203ENST00000578063 ARHGAP10A1A4S6 786 aa17.71■□□□□ 0.43
PRKCA-203ENST00000578063 SCAMP2O15127 329 aaKnown RBP17.71■□□□□ 0.43
PRKCA-203ENST00000578063 GLB1P16278 677 aa17.71■□□□□ 0.43
PRKCA-203ENST00000578063 RPL3P39023 403 aaKnown RBP17.71■□□□□ 0.43
PRKCA-203ENST00000578063 STXBP1P61764 594 aaKnown RBP17.71■□□□□ 0.43
PRKCA-203ENST00000578063 PPP1CAP62136 330 aa17.71■□□□□ 0.43
PRKCA-203ENST00000578063 ELF3P78545 371 aaPredicted RBP17.71■□□□□ 0.43
PRKCA-203ENST00000578063 RGS1Q08116 209 aa17.71■□□□□ 0.43
PRKCA-203ENST00000578063 HKDC1Q2TB90 917 aa17.71■□□□□ 0.43
PRKCA-203ENST00000578063 PAGE3Q5JUK9 113 aa17.71■□□□□ 0.43
PRKCA-203ENST00000578063 CCNYL2Q5T2Q4 361 aa17.71■□□□□ 0.43
PRKCA-203ENST00000578063 FBXO42Q6P3S6 717 aa17.71■□□□□ 0.43
PRKCA-203ENST00000578063 RNF44Q7L0R7 432 aa17.71■□□□□ 0.43
PRKCA-203ENST00000578063 VN1R4Q7Z5H5 301 aa17.71■□□□□ 0.43
PRKCA-203ENST00000578063 MINDY1Q8N5J2 469 aa17.71■□□□□ 0.43
PRKCA-203ENST00000578063 FAM13CQ8NE31 585 aa17.71■□□□□ 0.43
PRKCA-203ENST00000578063 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.71■□□□□ 0.43
PRKCA-203ENST00000578063 NT5CQ8TCD5 201 aa17.71■□□□□ 0.43
PRKCA-203ENST00000578063 SAP25Q8TEE9 199 aa17.71■□□□□ 0.43
PRKCA-203ENST00000578063 OR2A5Q96R48 311 aa17.71■□□□□ 0.43
PRKCA-203ENST00000578063 RAB33BQ9H082 229 aa17.71■□□□□ 0.43
PRKCA-203ENST00000578063 SPAG4Q9NPE6 437 aa17.71■□□□□ 0.43
PRKCA-203ENST00000578063 SLC6A14Q9UN76 642 aa17.71■□□□□ 0.43
PRKCA-203ENST00000578063 FAM86C2PA6NEL3 165 aa17.7■□□□□ 0.42
PRKCA-203ENST00000578063 AKAP10O43572 662 aa17.7■□□□□ 0.42
PRKCA-203ENST00000578063 CTSVO60911 334 aa17.7■□□□□ 0.42
PRKCA-203ENST00000578063 CIB2O75838 187 aa17.7■□□□□ 0.42
PRKCA-203ENST00000578063 CER1O95813 267 aa17.7■□□□□ 0.42
PRKCA-203ENST00000578063 SLC35G6P0C7Q6 338 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms