RNA–Protein interactions for RNA: ENST00000575643.1

PSMB6-204, Transcript of proteasome subunit beta 6, humanhuman

TSL 2

Gene PSMB6, Length 666 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB6-204ENST00000575643 DEFB134Q4QY38 66 aa12.48□□□□□ -0.41
PSMB6-204ENST00000575643 DUPD1Q68J44 220 aa12.48□□□□□ -0.41
PSMB6-204ENST00000575643 CAPN12Q6ZSI9 719 aa12.48□□□□□ -0.41
PSMB6-204ENST00000575643 SYDE1Q6ZW31 735 aaPredicted RBP12.48□□□□□ -0.41
PSMB6-204ENST00000575643 TMPRSS11BQ86T26 416 aa12.48□□□□□ -0.41
PSMB6-204ENST00000575643 ZC3HC1Q86WB0 502 aaKnown RBP12.48□□□□□ -0.41
PSMB6-204ENST00000575643 AFAP1L2Q8N4X5 818 aa12.48□□□□□ -0.41
PSMB6-204ENST00000575643 BCORP1Q8N888 145 aa12.48□□□□□ -0.41
PSMB6-204ENST00000575643 FBXO36Q8NEA4 188 aa12.48□□□□□ -0.41
PSMB6-204ENST00000575643 METTL21AQ8WXB1 218 aa12.48□□□□□ -0.41
PSMB6-204ENST00000575643 SNF8Q96H20 258 aa12.48□□□□□ -0.41
PSMB6-204ENST00000575643 CYTH2Q99418 400 aa12.48□□□□□ -0.41
PSMB6-204ENST00000575643 NPAS2Q99743 824 aa12.48□□□□□ -0.41
PSMB6-204ENST00000575643 NAPGQ99747 312 aaPredicted RBP12.48□□□□□ -0.41
PSMB6-204ENST00000575643 UNKQ9C0B0 810 aaKnown RBP12.48□□□□□ -0.41
PSMB6-204ENST00000575643 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.48□□□□□ -0.41
PSMB6-204ENST00000575643 ZFATQ9P243 1243 aa12.48□□□□□ -0.41
PSMB6-204ENST00000575643 CORO1CQ9ULV4 474 aaPredicted RBP12.48□□□□□ -0.41
PSMB6-204ENST00000575643 VWA7Q9Y334 891 aa12.48□□□□□ -0.41
PSMB6-204ENST00000575643 ITPR2Q14571 2701 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 TRAV17A0A0B4J275 112 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 TRBC2A0A5B9 178 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 PABPN1LA6NDY0 278 aaKnown RBP12.47□□□□□ -0.41
PSMB6-204ENST00000575643 LRRTM2O43300 516 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 SERPIND1P05546 499 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 HIST1H2AGP0C0S8 130 aaPredicted RBP12.47□□□□□ -0.41
PSMB6-204ENST00000575643 ZNF888P0CJ79 500 aaPredicted RBP12.47□□□□□ -0.41
PSMB6-204ENST00000575643 HIST1H2ADP20671 130 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 GRK3P35626 688 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 TAS2R39P59534 338 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 MGAT5Q09328 741 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 PDIA2Q13087 525 aaKnown RBP12.47□□□□□ -0.41
PSMB6-204ENST00000575643 INAQ16352 499 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 ABHD17BQ5VST6 288 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 C1QL3Q5VWW1 255 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 PLAG1Q6DJT9 500 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 RPUSD3Q6P087 351 aaKnown RBP12.47□□□□□ -0.41
PSMB6-204ENST00000575643 STRA8Q7Z7C7 330 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 BEST3Q8N1M1 668 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 ANKRD53Q8N9V6 530 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 OR4K1Q8NGD4 311 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 ANKRD49Q8WVL7 239 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 SLC5A11Q8WWX8 675 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 NR4A3Q92570 626 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 HAS2Q92819 552 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 LRRC39Q96DD0 335 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 HIST1H2AHQ96KK5 128 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 HIST1H2AJQ99878 128 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 H2AFJQ9BTM1 129 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 SARGQ9BW04 601 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 HES7Q9BYE0 225 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 AICDAQ9GZX7 198 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 RNF32Q9H0A6 362 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 SMYD2Q9NRG4 433 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 C19orf25Q9UFG5 118 aaPredicted RBP12.47□□□□□ -0.41
PSMB6-204ENST00000575643 SLC22A7Q9Y694 548 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 NOTCH2Q04721 2471 aa12.47□□□□□ -0.41
PSMB6-204ENST00000575643 OR5H15A6NDH6 313 aa12.46□□□□□ -0.41
PSMB6-204ENST00000575643 E7ESA3 106 aa12.46□□□□□ -0.41
PSMB6-204ENST00000575643 GALR3O60755 368 aaPredicted RBP12.46□□□□□ -0.41
PSMB6-204ENST00000575643 ZG16O60844 167 aa12.46□□□□□ -0.41
PSMB6-204ENST00000575643 WISP2O76076 250 aa12.46□□□□□ -0.41
PSMB6-204ENST00000575643 CYC1P08574 325 aa12.46□□□□□ -0.41
PSMB6-204ENST00000575643 ENO2P09104 434 aaPredicted RBP12.46□□□□□ -0.41
PSMB6-204ENST00000575643 MST1P26927 711 aa12.46□□□□□ -0.41
PSMB6-204ENST00000575643 SCTRP47872 440 aa12.46□□□□□ -0.41
PSMB6-204ENST00000575643 FRG1Q14331 258 aaKnown RBP12.46□□□□□ -0.41
PSMB6-204ENST00000575643 HERC3Q15034 1050 aa12.46□□□□□ -0.41
PSMB6-204ENST00000575643 TSNQ15631 228 aaKnown RBP12.46□□□□□ -0.41
PSMB6-204ENST00000575643 SFT2D3Q587I9 215 aa12.46□□□□□ -0.41
PSMB6-204ENST00000575643 PAPD4Q6PIY7 484 aaKnown RBP12.46□□□□□ -0.41
PSMB6-204ENST00000575643 FJX1Q86VR8 437 aa12.46□□□□□ -0.41
PSMB6-204ENST00000575643 THOC6Q86W42 341 aaKnown RBP12.46□□□□□ -0.41
PSMB6-204ENST00000575643 CEP97Q8IW35 865 aa12.46□□□□□ -0.41
PSMB6-204ENST00000575643 RUNDC3BQ96NL0 473 aa12.46□□□□□ -0.41
PSMB6-204ENST00000575643 KRT12Q99456 494 aa12.46□□□□□ -0.41
PSMB6-204ENST00000575643 MCMBPQ9BTE3 642 aa12.46□□□□□ -0.41
PSMB6-204ENST00000575643 ANKRD10Q9NXR5 420 aa12.46□□□□□ -0.41
PSMB6-204ENST00000575643 SNX24Q9Y343 169 aa12.46□□□□□ -0.41
PSMB6-204ENST00000575643 SAR1BQ9Y6B6 198 aa12.46□□□□□ -0.41
PSMB6-204ENST00000575643 A8MUI8 341 aa12.45□□□□□ -0.42
PSMB6-204ENST00000575643 EFCAB8A8MWE9 144 aa12.45□□□□□ -0.42
PSMB6-204ENST00000575643 PRAMEF2O60811 474 aa12.45□□□□□ -0.42
PSMB6-204ENST00000575643 FHP07954 510 aa12.45□□□□□ -0.42
PSMB6-204ENST00000575643 STSP08842 583 aa12.45□□□□□ -0.42
PSMB6-204ENST00000575643 ALOX12P18054 663 aa12.45□□□□□ -0.42
PSMB6-204ENST00000575643 HNF4AP41235 474 aa12.45□□□□□ -0.42
PSMB6-204ENST00000575643 AGTR2P50052 363 aa12.45□□□□□ -0.42
PSMB6-204ENST00000575643 HYAL2Q12891 473 aa12.45□□□□□ -0.42
PSMB6-204ENST00000575643 CSHL1Q14406 222 aa12.45□□□□□ -0.42
PSMB6-204ENST00000575643 USP10Q14694 798 aaKnown RBP12.45□□□□□ -0.42
PSMB6-204ENST00000575643 NSDHLQ15738 373 aa12.45□□□□□ -0.42
PSMB6-204ENST00000575643 CRLF3Q8IUI8 442 aa12.45□□□□□ -0.42
PSMB6-204ENST00000575643 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.45□□□□□ -0.422e-7■■■■■ 278.5
PSMB6-204ENST00000575643 ZBED8Q8IZ13 594 aa12.45□□□□□ -0.42
PSMB6-204ENST00000575643 KIF2BQ8N4N8 673 aa12.45□□□□□ -0.42
PSMB6-204ENST00000575643 NT5CQ8TCD5 201 aa12.45□□□□□ -0.42
PSMB6-204ENST00000575643 UTP15Q8TED0 518 aaKnown RBP12.45□□□□□ -0.42
PSMB6-204ENST00000575643 ATL1Q8WXF7 558 aa12.45□□□□□ -0.42
PSMB6-204ENST00000575643 PDLIM5Q96HC4 596 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms