RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 SHROOM3Q8TF72 1996 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 RP1P56715 2156 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 EME2A4GXA9 379 aaPredicted RBP4.66□□□□□ -1.66
PRPF8-211ENST00000574728 RGSL1A5PLK6 1076 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 FAM149AA5PLN7 773 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 AGAP14A8MT82 685 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 NTN3O00634 580 aaPredicted RBP4.66□□□□□ -1.66
PRPF8-211ENST00000574728 PCDH17O14917 1159 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 CHUKO15111 745 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 LIASO43766 372 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 JTBO76095 146 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 USP1O94782 785 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 LDOC1O95751 146 aaPredicted RBP4.66□□□□□ -1.66
PRPF8-211ENST00000574728 FGF1P05230 155 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 IVLP07476 585 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 HNRNPCP07910 306 aaKnown RBP eCLIP4.66□□□□□ -1.66
PRPF8-211ENST00000574728 ANXA6P08133 673 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 ITGA2BP08514 1039 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 CYP2A6P11509 494 aaPredicted RBP4.66□□□□□ -1.66
PRPF8-211ENST00000574728 FPR3P25089 353 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 ITPKBP27987 946 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 PSMB4P28070 264 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 HMGCLP35914 325 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 SERPINF1P36955 418 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 DIO1P49895 249 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 ZNF140P52738 457 aaPredicted RBP4.66□□□□□ -1.66
PRPF8-211ENST00000574728 THOP1P52888 689 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 POLE2P56282 527 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 DCDC1P59894 354 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 EIF3EP60228 445 aaKnown RBP4.66□□□□□ -1.66
PRPF8-211ENST00000574728 XIAPP98170 497 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 PSG6Q00889 435 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 PPARDQ03181 441 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 COL10A1Q03692 680 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 ILKQ13418 452 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 SLC1A5Q15758 541 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 P3H1Q32P28 736 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 TUBB8Q3ZCM7 444 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 ZNF658BQ4V348 819 aaPredicted RBP4.66□□□□□ -1.66
PRPF8-211ENST00000574728 PYCR3Q53H96 274 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 ANKRD20A2Q5SQ80 823 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 LCE5AQ5TCM9 118 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 ANKRD20A1Q5TYW2 823 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 ANKRD20A3Q5VUR7 823 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 GRHL2Q6ISB3 625 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 GUSBP11Q6P575 273 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 LVRNQ6Q4G3 990 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 KIRREL2Q6UWL6 708 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 ENPP7Q6UWV6 458 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 BZW1Q7L1Q6 419 aaKnown RBP4.66□□□□□ -1.66
PRPF8-211ENST00000574728 KDELC2Q7Z4H8 507 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 PRUNE1Q86TP1 453 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 SLC13A5Q86YT5 568 aaPredicted RBP4.66□□□□□ -1.66
PRPF8-211ENST00000574728 CCDC50Q8IVM0 306 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 ZNF547Q8IVP9 402 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 NRSN1Q8IZ57 195 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 PRELID2Q8N945 189 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 CCDC112Q8NEF3 446 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.66□□□□□ -1.66
PRPF8-211ENST00000574728 LMX1AQ8TE12 382 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 WDR60Q8WVS4 1066 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 AP2M1Q96CW1 435 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 DAZAP1Q96EP5 407 aaKnown RBP4.66□□□□□ -1.66
PRPF8-211ENST00000574728 PRR11Q96HE9 360 aaPredicted RBP4.66□□□□□ -1.66
PRPF8-211ENST00000574728 ZNF830Q96NB3 372 aaPredicted RBP4.66□□□□□ -1.66
PRPF8-211ENST00000574728 VAT1Q99536 393 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 ANP32EQ9BTT0 268 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 C1QTNF7Q9BXJ2 289 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 CARD9Q9H257 536 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 TP63Q9H3D4 680 aaPredicted RBP4.66□□□□□ -1.66
PRPF8-211ENST00000574728 EPS8L2Q9H6S3 715 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 TRNAU1APQ9NX07 287 aaKnown RBP4.66□□□□□ -1.66
PRPF8-211ENST00000574728 SPASTQ9UBP0 616 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 LPAR3Q9UBY5 353 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 KLQ9UEF7 1012 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 SLC23A2Q9UGH3 650 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 APOBEC3BQ9UH17 382 aaKnown RBP4.66□□□□□ -1.66
PRPF8-211ENST00000574728 FAM153AQ9UHL3 310 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 SUFUQ9UMX1 484 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 GUCA1BQ9UMX6 200 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 TMEM98Q9Y2Y6 226 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.66□□□□□ -1.66
PRPF8-211ENST00000574728 ZNF711Q9Y462 761 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 TTLL3Q9Y4R7 772 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 GCN1Q92616 2671 aaKnown RBP4.66□□□□□ -1.66
PRPF8-211ENST00000574728 ANKRD36A6QL64 1941 aa4.66□□□□□ -1.66
PRPF8-211ENST00000574728 FASNP49327 2511 aaKnown RBP4.66□□□□□ -1.66
PRPF8-211ENST00000574728 PRRC2CQ9Y520 2896 aaKnown RBP4.65□□□□□ -1.66
PRPF8-211ENST00000574728 URB1O60287 2271 aaKnown RBP4.65□□□□□ -1.66
PRPF8-211ENST00000574728 FLNCQ14315 2725 aa4.65□□□□□ -1.66
PRPF8-211ENST00000574728 C1orf232A0A0U1RR37 186 aa4.65□□□□□ -1.67
PRPF8-211ENST00000574728 A0A1W2PQM1 296 aa4.65□□□□□ -1.67
PRPF8-211ENST00000574728 USP27XA6NNY8 438 aa4.65□□□□□ -1.67
PRPF8-211ENST00000574728 H7C0C1 242 aa4.65□□□□□ -1.67
PRPF8-211ENST00000574728 CACNB4O00305 520 aaPredicted RBP4.65□□□□□ -1.67
PRPF8-211ENST00000574728 KCNN4O15554 427 aa4.65□□□□□ -1.67
PRPF8-211ENST00000574728 LDB2O43679 373 aa4.65□□□□□ -1.67
PRPF8-211ENST00000574728 USP12O75317 370 aa4.65□□□□□ -1.67
PRPF8-211ENST00000574728 IPO7O95373 1038 aaKnown RBP4.65□□□□□ -1.67
PRPF8-211ENST00000574728 TNFRSF6BO95407 300 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms