RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 RRP15Q9Y3B9 282 aaKnown RBP9.19□□□□□ -0.94
NPLOC4-216ENST00000574344 ZGRF1Q86YA3 2104 aa9.19□□□□□ -0.94
NPLOC4-216ENST00000574344 USP9XQ93008 2570 aaPredicted RBP9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 A0A0A6YYC8 382 aaPredicted RBP9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 NSG1A0A0A6YYJ2 146 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 VSTM2BA6NLU5 285 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 IDSB3KWA1 339 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 I3L1I5 382 aaPredicted RBP9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 P2RX6O15547 441 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 ONECUT2O95948 504 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 HPP00738 406 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 HIST1H2AGP0C0S8 130 aaPredicted RBP9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 HIST1H2ADP20671 130 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 GRK3P35626 688 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 SKIV2L2P42285 1042 aaKnown RBP9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 AVPR1BP47901 424 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 EMP2P54851 167 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 EMP3P54852 163 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 SOX8P57073 446 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 RPS15AP62244 130 aaKnown RBP9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 SPTBN1Q01082 2364 aaKnown RBP9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 SRSF1Q07955 248 aaKnown RBP eCLIP9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 MRPL49Q13405 166 aaKnown RBP9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 DSG2Q14126 1118 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 EFTUD2Q15029 972 aaKnown RBP eCLIP9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 NR6A1Q15406 480 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 KBTBD12Q3ZCT8 623 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 HIVEP3Q5T1R4 2406 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 GARNL3Q5VVW2 1013 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 PAQR3Q6TCH7 311 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 CYHR1Q6ZMK1 362 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 LINC00696Q6ZRV3 163 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 KIAA0408Q6ZU52 694 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 YTHDF3Q7Z739 585 aaKnown RBP9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 C17orf64Q86WR6 236 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 CISD2Q8N5K1 135 aaKnown RBP9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 PPM1NQ8N819 430 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 PRR7Q8TB68 274 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 ZCCHC10Q8TBK6 192 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 LRRC8CQ8TDW0 803 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 SLC44A1Q8WWI5 657 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 SNRNP40Q96DI7 357 aaKnown RBP9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 C19orf60Q96EN9 201 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 HIST1H2AHQ96KK5 128 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 CCDC138Q96M89 665 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 OR2A5Q96R48 311 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 HIST1H2AJQ99878 128 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 H2AFJQ9BTM1 129 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 ATG10Q9H0Y0 220 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 ZBTB20Q9HC78 741 aaPredicted RBP9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 MKKSQ9NPJ1 570 aaPredicted RBP9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 ENAMQ9NRM1 1142 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 ADAMTS6Q9UKP5 1117 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 PDE10AQ9Y233 779 aa9.18□□□□□ -0.94
NPLOC4-216ENST00000574344 ICE1Q9Y2F5 2266 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 CLEC18AA5D8T8 446 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 TCP11X1B4DZS4 312 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 SNRPAP09012 282 aaKnown RBP9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 NEFHP12036 1026 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 CDH1P12830 882 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 KRT4P19013 534 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 SAT1P21673 171 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 DRD4P21917 467 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 CCND1P24385 295 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 HRH2P25021 359 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 GCAP28676 217 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 CDKN2DP55273 166 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 IL2P60568 153 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 MAT1AQ00266 395 aaKnown RBP9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 NAE1Q13564 534 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 SYT16Q17RD7 645 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 EIF2S3LQ2VIR3 472 aaKnown RBP9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 FAM45BPQ6NSW5 357 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 AGTRAPQ6RW13 159 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 IGFL3Q6UXB1 125 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 CLEC18BQ6UXF7 455 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 CNTN4Q8IWV2 1026 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 TRIM42Q8IWZ5 723 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 KBTBD2Q8IY47 623 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 LRRC56Q8IYG6 542 aaPredicted RBP9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 C4orf33Q8N1A6 199 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 CLEC18CQ8NCF0 446 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 DNAJB14Q8TBM8 379 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 FAM45AQ8TCE6 357 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 PPP4R1Q8TF05 950 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 DCAKDQ8WVC6 231 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 CKAP2Q8WWK9 683 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 SEC16BQ96JE7 1060 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 MESP1Q9BRJ9 268 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 TRIM54Q9BYV2 358 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 PCBD2Q9H0N5 130 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 SYNPO2LQ9H987 977 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 PARVBQ9HBI1 364 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 TMEM184CQ9NVA4 438 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 RIC8BQ9NVN3 520 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 ASF1BQ9NVP2 202 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 ARL15Q9NXU5 204 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 NSMCE4AQ9NXX6 385 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 ZFATQ9P243 1243 aa9.17□□□□□ -0.94
NPLOC4-216ENST00000574344 MKL2Q9ULH7 1088 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms