RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 CLEC3AO75596 197 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 WFS1O76024 890 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 NSA2O95478 260 aaKnown RBP12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 CLDN9O95484 217 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 OTCP00480 354 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 IMPDH1P20839 514 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 ZNF10P21506 573 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 FOLR3P41439 243 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 TGM3Q08188 693 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 ASPHQ12797 758 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 DSG2Q14126 1118 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 E2F2Q14209 437 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 RBBP7Q16576 425 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 BEND6Q5SZJ8 279 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 C19orf48Q6RUI8 117 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 OVCH1Q7RTY7 1134 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 TMEM151AQ8N4L1 468 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 ANKRD53Q8N9V6 530 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 KCT2Q8NC54 265 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 ZCCHC10Q8TBK6 192 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 SNRNP27Q8WVK2 155 aaKnown RBP12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 SREK1Q8WXA9 508 aaKnown RBP12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 CATSPER2Q96P56 530 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 ZIM3Q96PE6 472 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 NTMT1Q9BV86 223 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 YIPF2Q9BWQ6 316 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 C1QTNF3Q9BXJ4 246 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 RHBGQ9H310 441 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 NOL11Q9H8H0 719 aaKnown RBP12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 WDR54Q9H977 334 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 ZNF282Q9UDV7 671 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 IL17BQ9UHF5 180 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 PCTPQ9UKL6 214 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 TCFL5Q9UL49 500 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 STK38LQ9Y2H1 464 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 MAU2Q9Y6X3 613 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 ZFHX4Q86UP3 3567 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 CACNA1BQ00975 2339 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 PKD1L2Q7Z442 2459 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 A0A0A6YYC8 382 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 FOXO6A8MYZ6 492 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 I3L1I5 382 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 DLX3O60479 287 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 PLIN3O60664 434 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 SUPT7LO94864 414 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 STATHP02808 62 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 PROCP04070 461 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 CAPN1P07384 714 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 RPS17P08708 135 aaKnown RBP12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 SBK3P0C264 359 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 ATXN8OSP0DMR3 200 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 PCNAP12004 261 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 ALOX12P18054 663 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 EPORP19235 508 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 F8A1P23610 371 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 OR1D4P47884 311 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 PRKAA2P54646 552 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 CYP4F2P78329 520 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 SRSF6Q13247 344 aaKnown RBP12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 SLC9A5Q14940 896 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 COL28A1Q2UY09 1125 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 C10orf62Q5T681 223 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 LCN10Q6JVE6 187 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 MRPL14Q6P1L8 145 aaKnown RBP12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 ZYG11AQ6WRX3 759 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 MILR1Q7Z6M3 343 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 RAB43Q86YS6 212 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 LAS2Q8IYD9 372 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 METTL27Q8N6F8 245 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 BANPQ8N9N5 519 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 SRFBP1Q8NEF9 429 aaKnown RBP12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 MYRIPQ8NFW9 859 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 VPS50Q96JG6 964 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 FAR2Q96K12 515 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 PKNOX2Q96KN3 472 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 IP6K3Q96PC2 410 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 MACROD1Q9BQ69 325 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 CENPKQ9BS16 269 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 SLC26A1Q9H2B4 701 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 PRORYQ9H606 182 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 SYNPO2LQ9H987 977 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 CLK4Q9HAZ1 481 aaKnown RBP12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 MKKSQ9NPJ1 570 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 SEMA4BQ9NPR2 832 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 PLLPQ9Y342 182 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 PTRH2Q9Y3E5 179 aaKnown RBP12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 MAP4K5Q9Y4K4 846 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 LAMA5O15230 3695 aa12.13□□□□□ -0.47
TRAPPC1-206ENST00000573989 LRRC14BA6NHZ5 514 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 H0YIV9 168 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 FOXS1O43638 330 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 MLYCDO95822 493 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 CPA3P15088 417 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 IL1RNP18510 177 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 PIK3CBP42338 1070 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 CLCQ05315 142 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 CDC20Q12834 499 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 ERV3-1Q14264 604 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 SSPNQ14714 243 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms