RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 C18orf21Q32NC0 220 aaPredicted RBP16.45■□□□□ 0.22
SMG6-214ENST00000573827 LINC00696Q6ZRV3 163 aa16.45■□□□□ 0.22
SMG6-214ENST00000573827 RIPOR1Q6ZS17 1223 aa16.45■□□□□ 0.22
SMG6-214ENST00000573827 CAPN12Q6ZSI9 719 aa16.45■□□□□ 0.22
SMG6-214ENST00000573827 MAATS1Q7Z4T9 603 aa16.45■□□□□ 0.22
SMG6-214ENST00000573827 THOC6Q86W42 341 aaKnown RBP16.45■□□□□ 0.22
SMG6-214ENST00000573827 CATSPER1Q8NEC5 780 aa16.45■□□□□ 0.22
SMG6-214ENST00000573827 OR5T3Q8NGG3 340 aa16.45■□□□□ 0.22
SMG6-214ENST00000573827 DNAJB14Q8TBM8 379 aa16.45■□□□□ 0.22
SMG6-214ENST00000573827 PYROXD1Q8WU10 500 aa16.45■□□□□ 0.22
SMG6-214ENST00000573827 RHBDF1Q96CC6 855 aa16.45■□□□□ 0.22
SMG6-214ENST00000573827 TSNARE1Q96NA8 513 aa16.45■□□□□ 0.22
SMG6-214ENST00000573827 TRIM54Q9BYV2 358 aa16.45■□□□□ 0.22
SMG6-214ENST00000573827 PHACTR1Q9C0D0 580 aa16.45■□□□□ 0.22
SMG6-214ENST00000573827 CAB39LQ9H9S4 337 aa16.45■□□□□ 0.22
SMG6-214ENST00000573827 PELI2Q9HAT8 420 aa16.45■□□□□ 0.22
SMG6-214ENST00000573827 NSMCE4AQ9NXX6 385 aa16.45■□□□□ 0.22
SMG6-214ENST00000573827 ZFP69BQ9UJL9 534 aa16.45■□□□□ 0.22
SMG6-214ENST00000573827 SLC22A14Q9Y267 594 aa16.45■□□□□ 0.22
SMG6-214ENST00000573827 NAALAD2Q9Y3Q0 740 aa16.45■□□□□ 0.22
SMG6-214ENST00000573827 IGHV3-20A0A0C4DH32 117 aa16.44■□□□□ 0.22
SMG6-214ENST00000573827 ZNF860A6NHJ4 632 aa16.44■□□□□ 0.22
SMG6-214ENST00000573827 NDUFS4O43181 175 aa16.44■□□□□ 0.22
SMG6-214ENST00000573827 OR1F1O43749 312 aa16.44■□□□□ 0.22
SMG6-214ENST00000573827 B3GALT4O96024 378 aa16.44■□□□□ 0.22
SMG6-214ENST00000573827 SLC35G6P0C7Q6 338 aa16.44■□□□□ 0.22
SMG6-214ENST00000573827 SMIM10L1P0DMW3 83 aa16.44■□□□□ 0.22
SMG6-214ENST00000573827 CXCR2P25025 360 aa16.44■□□□□ 0.22
SMG6-214ENST00000573827 GRK3P35626 688 aa16.44■□□□□ 0.22
SMG6-214ENST00000573827 AHRP35869 848 aa16.44■□□□□ 0.22
SMG6-214ENST00000573827 POU4F1Q01851 419 aa16.44■□□□□ 0.22
SMG6-214ENST00000573827 GUCY2DQ02846 1103 aa16.44■□□□□ 0.22
SMG6-214ENST00000573827 ZNF169Q14929 603 aaPredicted RBP16.44■□□□□ 0.22
SMG6-214ENST00000573827 NR6A1Q15406 480 aa16.44■□□□□ 0.22
SMG6-214ENST00000573827 B3GNTL1Q67FW5 361 aaPredicted RBP16.44■□□□□ 0.22
SMG6-214ENST00000573827 NXPE4Q6UWF7 544 aa16.44■□□□□ 0.22
SMG6-214ENST00000573827 SYT10Q6XYQ8 523 aa16.44■□□□□ 0.22
SMG6-214ENST00000573827 FBXO25Q8TCJ0 367 aa16.44■□□□□ 0.22
SMG6-214ENST00000573827 CREB3L4Q8TEY5 395 aa16.44■□□□□ 0.22
SMG6-214ENST00000573827 SMIM10Q96HG1 83 aa16.44■□□□□ 0.22
SMG6-214ENST00000573827 GPR22Q99680 433 aa16.44■□□□□ 0.22
SMG6-214ENST00000573827 TUBB6Q9BUF5 446 aa16.44■□□□□ 0.22
SMG6-214ENST00000573827 SLC6A16Q9GZN6 736 aa16.44■□□□□ 0.22
SMG6-214ENST00000573827 DERL2Q9GZP9 239 aa16.44■□□□□ 0.22
SMG6-214ENST00000573827 ANKHQ9HCJ1 492 aa16.44■□□□□ 0.22
SMG6-214ENST00000573827 COPG1Q9Y678 874 aaKnown RBP16.44■□□□□ 0.22
SMG6-214ENST00000573827 LRBAP50851 2863 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 BLACEA4D250 179 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 WIPF3A6NGB9 483 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 TAPBPO15533 448 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 PRAMEF4O60810 478 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 TBX6O95947 436 aaPredicted RBP16.43■□□□□ 0.22
SMG6-214ENST00000573827 ALOX12P18054 663 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 GDF5P43026 501 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 CALCOCO2Q13137 446 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 CSHL1Q14406 222 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 HERC3Q15034 1050 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 TLR1Q15399 786 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 FHL5Q5TD97 284 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 IRAK1BP1Q5VVH5 260 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 PRAMEF9Q5VWM5 478 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 SLCO4C1Q6ZQN7 724 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 ANKRD37Q7Z713 158 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 ADAMTSL2Q86TH1 951 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 SPATA6LQ8N4H0 392 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 SIRT6Q8N6T7 355 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 PLPP5Q8NEB5 264 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 UTP15Q8TED0 518 aaKnown RBP16.43■□□□□ 0.22
SMG6-214ENST00000573827 HAS2Q92819 552 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 UBXN10Q96LJ8 280 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 RBBP8Q99708 897 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 SLC29A3Q9BZD2 475 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 UNKQ9C0B0 810 aaKnown RBP16.43■□□□□ 0.22
SMG6-214ENST00000573827 EPS8L2Q9H6S3 715 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 GPAMQ9HCL2 828 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 PLA2G3Q9NZ20 509 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 PTGFRNQ9P2B2 879 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 COPG2Q9UBF2 871 aa16.43■□□□□ 0.22
SMG6-214ENST00000573827 PHGDHO43175 533 aaKnown RBP16.42■□□□□ 0.22
SMG6-214ENST00000573827 CD1DP15813 335 aa16.42■□□□□ 0.22
SMG6-214ENST00000573827 CASQ1P31415 396 aa16.42■□□□□ 0.22
SMG6-214ENST00000573827 GGT5P36269 586 aa16.42■□□□□ 0.22
SMG6-214ENST00000573827 GMPRP36959 345 aa16.42■□□□□ 0.22
SMG6-214ENST00000573827 GLRBP48167 497 aa16.42■□□□□ 0.22
SMG6-214ENST00000573827 HNMTP50135 292 aa16.42■□□□□ 0.22
SMG6-214ENST00000573827 TNFSF10P50591 281 aa16.42■□□□□ 0.22
SMG6-214ENST00000573827 ILF2Q12905 390 aaKnown RBP16.42■□□□□ 0.22
SMG6-214ENST00000573827 MINDY4Q4G0A6 757 aa16.42■□□□□ 0.22
SMG6-214ENST00000573827 DEFB134Q4QY38 66 aa16.42■□□□□ 0.22
SMG6-214ENST00000573827 ZNF324BQ6AW86 544 aaPredicted RBP16.42■□□□□ 0.22
SMG6-214ENST00000573827 PLAG1Q6DJT9 500 aa16.42■□□□□ 0.22
SMG6-214ENST00000573827 RPUSD3Q6P087 351 aaKnown RBP16.42■□□□□ 0.22
SMG6-214ENST00000573827 CPEB2Q7Z5Q1 589 aaKnown RBP16.42■□□□□ 0.22
SMG6-214ENST00000573827 TSLPQ969D9 159 aa16.42■□□□□ 0.22
SMG6-214ENST00000573827 OR1F2PQ96R84 312 aa16.42■□□□□ 0.22
SMG6-214ENST00000573827 NPAS2Q99743 824 aa16.42■□□□□ 0.22
SMG6-214ENST00000573827 CPNE1Q99829 537 aa16.42■□□□□ 0.22
SMG6-214ENST00000573827 SLX1AQ9BQ83 275 aa16.42■□□□□ 0.22
SMG6-214ENST00000573827 TMEM79Q9BSE2 394 aa16.42■□□□□ 0.22
SMG6-214ENST00000573827 RNF32Q9H0A6 362 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms