RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 THAP1Q9NVV9 213 aa11.33□□□□□ -0.6
NDE1-206ENST00000572967 TAC3Q9UHF0 121 aa11.33□□□□□ -0.6
NDE1-206ENST00000572967 CCDC88CQ9P219 2028 aa11.33□□□□□ -0.6
NDE1-206ENST00000572967 PCM1Q15154 2024 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 A0A0J9YY10 115 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 ARGFXA6NJG6 315 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 E7EQ34 232 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 E2F3O00716 465 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 TAPBPO15533 448 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 SIX3O95343 332 aaPredicted RBP11.32□□□□□ -0.6
NDE1-206ENST00000572967 PDGFAP04085 211 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 ENO1P06733 434 aaKnown RBP11.32□□□□□ -0.6
NDE1-206ENST00000572967 KLK3P07288 261 aaPredicted RBP11.32□□□□□ -0.6
NDE1-206ENST00000572967 BGNP21810 368 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 GSTM2P28161 218 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 SERPINB1P30740 379 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 RORAP35398 523 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 MDH1P40925 334 aaKnown RBP11.32□□□□□ -0.6
NDE1-206ENST00000572967 CASRP41180 1078 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 HNF4AP41235 474 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 AGTR2P50052 363 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 CCR8P51685 355 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 HK2P52789 917 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 PHEXP78562 749 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 IRF8Q02556 426 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 PRDX1Q06830 199 aaKnown RBP11.32□□□□□ -0.6
NDE1-206ENST00000572967 TBCCQ15814 346 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 ZIC1Q15915 447 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 ICE2Q659A1 982 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 RGS9BPQ6ZS82 235 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 GPRIN3Q6ZVF9 776 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 GOLGA7Q7Z5G4 137 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 KRT78Q8N1N4 520 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 LMNTD1Q8N9Z9 388 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 LINC01555Q8NAE3 123 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 CKAP2Q8WWK9 683 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 FAR2Q96K12 515 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 OR2A14Q96R47 310 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 AIF1LQ9BQI0 150 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 MECRQ9BV79 373 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 GATA5Q9BWX5 397 aaPredicted RBP11.32□□□□□ -0.6
NDE1-206ENST00000572967 SLC29A3Q9BZD2 475 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 IPPKQ9H8X2 491 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 FAM60AQ9NP50 221 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 MRPS30Q9NP92 439 aaKnown RBP11.32□□□□□ -0.6
NDE1-206ENST00000572967 ABCF3Q9NUQ8 709 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 IRAK4Q9NWZ3 460 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 ANAPC2Q9UJX6 822 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 SLC22A14Q9Y267 594 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.32□□□□□ -0.6
NDE1-206ENST00000572967 CFAP46Q8IYW2 2715 aa11.32□□□□□ -0.6
NDE1-206ENST00000572967 KRT87PA6NCN2 255 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 SLCO1B7G3V0H7 640 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 MEN1O00255 615 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 ZNF749O43361 778 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 HCRTR1O43613 425 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 CLDN9O95484 217 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 CTSBP07858 339 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 ABCE1P61221 599 aaKnown RBP11.31□□□□□ -0.6
NDE1-206ENST00000572967 PCDH1Q08174 1060 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 SLC9A5Q14940 896 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 UNC50Q53HI1 259 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 XKR6Q5GH73 641 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 C1orf189Q5VU69 101 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 LIPJQ5W064 366 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 SUSD1Q6UWL2 747 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 ZNF517Q6ZMY9 492 aaPredicted RBP11.31□□□□□ -0.6
NDE1-206ENST00000572967 ASB18Q6ZVZ8 466 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 ADCK2Q7Z695 626 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 TMPRSS11BQ86T26 416 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 MYLK4Q86YV6 388 aaPredicted RBP11.31□□□□□ -0.6
NDE1-206ENST00000572967 CRLF3Q8IUI8 442 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 SPNS2Q8IVW8 549 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 LRRC56Q8IYG6 542 aaPredicted RBP11.31□□□□□ -0.6
NDE1-206ENST00000572967 GPR135Q8IZ08 494 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 C2orf73Q8N5S3 287 aaPredicted RBP11.31□□□□□ -0.6
NDE1-206ENST00000572967 PPFIBP2Q8ND30 876 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 TTLQ8NG68 377 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 OR2L3Q8NG85 312 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 FLVCR1-AS1Q8TAF5 88 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 PYCR2Q96C36 320 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 PTCD3Q96EY7 689 aaKnown RBP11.31□□□□□ -0.6
NDE1-206ENST00000572967 SEC16BQ96JE7 1060 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 LRFN5Q96NI6 719 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 NTMT1Q9BV86 223 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 GPR87Q9BY21 358 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 ILKAPQ9H0C8 392 aaPredicted RBP11.31□□□□□ -0.6
NDE1-206ENST00000572967 NSRP1Q9H0G5 558 aaKnown RBP11.31□□□□□ -0.6
NDE1-206ENST00000572967 CCDC134Q9H6E4 229 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 PRM3Q9NNZ6 103 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 SEMA4BQ9NPR2 832 aaPredicted RBP11.31□□□□□ -0.6
NDE1-206ENST00000572967 ACSS2Q9NR19 701 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 FAM53CQ9NYF3 392 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 TRPS1Q9UHF7 1281 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 FARSAQ9Y285 508 aaKnown RBP11.31□□□□□ -0.6
NDE1-206ENST00000572967 KLHL20Q9Y2M5 609 aa11.31□□□□□ -0.6
NDE1-206ENST00000572967 C9J4A7 227 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 OR2B3O76000 313 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 ESRRBO95718 433 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 KRT6AP02538 564 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms