RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 RRP15Q9Y3B9 282 aaKnown RBP5.23□□□□□ -1.57
SF3B3-214ENST00000572365 NBEAL1Q6ZS30 2694 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 PIKFYVEQ9Y2I7 2098 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 A0A0G2JK05 382 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 LOC101059948A0A1B0GTJ6 334 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 A6NCN8 305 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 ERICH4A6NGS2 130 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 C10orf142B7Z368 130 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 HHLA1C9JL84 531 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 E5RJQ4 531 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 NTN3O00634 580 aaPredicted RBP5.22□□□□□ -1.57
SF3B3-214ENST00000572365 MAGEC1O60732 1142 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 PFKFB2O60825 505 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 TIPRLO75663 272 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 GFPT2O94808 682 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 PAK4O96013 591 aaPredicted RBP5.22□□□□□ -1.57
SF3B3-214ENST00000572365 LDLRP01130 860 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 TNNC2P02585 160 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 SLC2A4P14672 509 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 MUTP22033 750 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 HNRNPH3P31942 346 aaKnown RBP5.22□□□□□ -1.57
SF3B3-214ENST00000572365 RYKP34925 604 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 ARHGAP25P42331 645 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 RPS24P62847 133 aaKnown RBP5.22□□□□□ -1.57
SF3B3-214ENST00000572365 TNNC1P63316 161 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 OLR1P78380 273 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 ID2Q02363 134 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 TMEM115Q12893 351 aaPredicted RBP5.22□□□□□ -1.57
SF3B3-214ENST00000572365 TRIM29Q14134 588 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 C16orf72Q14CZ0 275 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 CCNG2Q16589 344 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 GSTA3Q16772 222 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 AMZ1Q400G9 498 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 ACCSLQ4AC99 568 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 MPPE1Q53F39 396 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 SETMARQ53H47 684 aaPredicted RBP5.22□□□□□ -1.57
SF3B3-214ENST00000572365 SLC18B1Q6NT16 456 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 ZNF793Q6ZN11 406 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 GCNT7Q6ZNI0 430 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 TRAPPC11Q7Z392 1133 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 SERPINA11Q86U17 422 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 GPAT4Q86UL3 456 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 SFR1Q86XK3 245 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 CBWD2Q8IUF1 395 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 CCDC50Q8IVM0 306 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 C10orf67Q8IYJ2 551 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 SYCP3Q8IZU3 236 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 DPP10Q8N608 796 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 CCDC127Q96BQ5 260 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 SMARCD1Q96GM5 515 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 SH3GL3Q99963 347 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 H2AFJQ9BTM1 129 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 STRA6Q9BX79 667 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 PRSS22Q9GZN4 317 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 GHITMQ9H3K2 345 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 FBXO44Q9H4M3 255 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 AAMDCQ9H7C9 122 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 PARVGQ9HBI0 331 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 NSMCE4AQ9NXX6 385 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 LIMA1Q9UHB6 759 aaKnown RBP5.22□□□□□ -1.57
SF3B3-214ENST00000572365 A4GNTQ9UNA3 340 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 GPR34Q9UPC5 381 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 SCML2Q9UQR0 700 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 KCNE2Q9Y6J6 123 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 STYXL1Q9Y6J8 313 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 RNF215Q9Y6U7 377 aa5.22□□□□□ -1.57
SF3B3-214ENST00000572365 SYCE3A1L190 88 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 FAM92AA1XBS5 289 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 D6RAR5 112 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 H0YCG3 227 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 RALAP11233 206 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 ZNF18P17022 549 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 CTPS1P17812 591 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 TNNI1P19237 187 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 TTKP33981 857 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 PTGER1P34995 402 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 HOXD13P35453 343 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 UGT1A3P35503 534 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 GPR12P47775 334 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 GABRB2P47870 512 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 CASP4P49662 377 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 NDST1P52848 882 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 GSDMDP57764 484 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 KRTAP10-9P60411 292 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 HNRNPKP61978 463 aaKnown RBP eCLIP5.21□□□□□ -1.58
SF3B3-214ENST00000572365 COG7P83436 770 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 ZNF91Q05481 1191 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 TUBB2AQ13885 445 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 CRYMQ14894 314 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 SLMAPQ14BN4 828 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 RNPS1Q15287 305 aaKnown RBP5.21□□□□□ -1.58
SF3B3-214ENST00000572365 RBBP5Q15291 538 aaKnown RBP5.21□□□□□ -1.58
SF3B3-214ENST00000572365 TPD52L1Q16890 204 aaPredicted RBP5.21□□□□□ -1.58
SF3B3-214ENST00000572365 SMTNL2Q2TAL5 461 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 ZNF284Q2VY69 593 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 AP1ARQ63HQ0 302 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 KLHL24Q6TFL4 600 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 ZNF720Q7Z2F6 126 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 YTHDF3Q7Z739 585 aaKnown RBP5.21□□□□□ -1.58
SF3B3-214ENST00000572365 IQCHQ86VS3 1027 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms