RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 NFKBIBQ15653 356 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 NSDHLQ15738 373 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 EXT1Q16394 746 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 SLC25A35Q3KQZ1 300 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 SHEQ5VZ18 495 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 ICE2Q659A1 982 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 C22orf34Q6ZV56 151 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 PRUNE1Q86TP1 453 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 CYP4Z2PQ8N1L4 340 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 SLC5A8Q8N695 610 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 FAM98AQ8NCA5 519 aaKnown RBP6.68□□□□□ -1.34
SMG6-205ENST00000570659 TMEM52Q8NDY8 209 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 PLPP5Q8NEB5 264 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 HEXDCQ8WVB3 486 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 IGFBPL1Q8WX77 278 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 METTL21AQ8WXB1 218 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 SLC22A18Q96BI1 424 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 PRAP1Q96NZ9 151 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 HS3ST6Q96QI5 342 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 PKP4Q99569 1192 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 RAB11FIP5Q9BXF6 653 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 P2RY12Q9H244 342 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 SLC6A15Q9H2J7 730 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 SPNS1Q9H2V7 528 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 VPS37BQ9H9H4 285 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 MRPS30Q9NP92 439 aaKnown RBP6.68□□□□□ -1.34
SMG6-205ENST00000570659 BEX4Q9NWD9 120 aaPredicted RBP6.68□□□□□ -1.34
SMG6-205ENST00000570659 ALKBH4Q9NXW9 302 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 TUBA8Q9NY65 449 aaPredicted RBP6.68□□□□□ -1.34
SMG6-205ENST00000570659 ADGRE2Q9UHX3 823 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 CDC14AQ9UNH5 594 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 NAALAD2Q9Y3Q0 740 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 ROS1P08922 2347 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 DOCK7Q96N67 2140 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 PRR14LQ5THK1 2151 aa6.68□□□□□ -1.34
SMG6-205ENST00000570659 DSCAMO60469 2012 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 TENM1Q9UKZ4 2725 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 IGKV3D-11A0A0A0MRZ8 115 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 TRBV11-1A0A0K0K1C0 115 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 A0A1B0GVC2 190 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 ATP6AP2A0A1C7CYW4 349 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 MAGEB17A8MXT2 336 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 PHF1O43189 567 aaPredicted RBP6.67□□□□□ -1.34
SMG6-205ENST00000570659 B4GALT2O60909 372 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 NIPSNAP2O75323 286 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 ITGA10O75578 1167 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 ATP6AP2O75787 350 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 LRATO95237 230 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 NSA2O95478 260 aaKnown RBP6.67□□□□□ -1.34
SMG6-205ENST00000570659 SERPING1P05155 500 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 TPM2P07951 284 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 GSTM1P09488 218 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 OR56A5P0C7T3 313 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 CCL3P10147 92 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 EPXP11678 715 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 SOX3P41225 446 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 NR2C2P49116 596 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 PPP2R2BQ00005 443 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 GSTM4Q03013 218 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 FOXF2Q12947 444 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 FAM53BQ14153 422 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 GBX1Q14549 363 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 NR1I3Q14994 352 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 FBXL19-AS1Q494R0 122 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 ACSBG2Q5FVE4 666 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 CT47A1Q5JQC4 288 aaPredicted RBP6.67□□□□□ -1.34
SMG6-205ENST00000570659 DCST1Q5T197 706 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 GARNL3Q5VVW2 1013 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 VSIG1Q86XK7 387 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 CYP4X1Q8N118 509 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 POGLUT1Q8NBL1 392 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 PSD4Q8NDX1 1056 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 SIMC1Q8NDZ2 872 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 GIMAP7Q8NHV1 300 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 ACTL9Q8TC94 416 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 ZNF480Q8WV37 535 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 RNASE6Q93091 150 aaKnown RBP6.67□□□□□ -1.34
SMG6-205ENST00000570659 TM4SF19Q96DZ7 209 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 LPAR4Q99677 370 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 MAK16Q9BXY0 300 aaKnown RBP6.67□□□□□ -1.34
SMG6-205ENST00000570659 EPB41L4BQ9H329 900 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 PROK2Q9HC23 129 aa6.67□□□□□ -1.34
SMG6-205ENST00000570659 C6orf203Q9P0P8 240 aaPredicted RBP6.67□□□□□ -1.34
SMG6-205ENST00000570659 DRG1Q9Y295 367 aaKnown RBP6.67□□□□□ -1.34
SMG6-205ENST00000570659 KLF13Q9Y2Y9 288 aaPredicted RBP6.67□□□□□ -1.34
SMG6-205ENST00000570659 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.67□□□□□ -1.347e-7■□□□□ 8.9
SMG6-205ENST00000570659 TGP01266 2768 aa6.66□□□□□ -1.34
SMG6-205ENST00000570659 SAGE2PA6NJ88 616 aa6.66□□□□□ -1.34
SMG6-205ENST00000570659 LRRC3CA6NJW4 275 aa6.66□□□□□ -1.34
SMG6-205ENST00000570659 DEFB108AA8MXU0 73 aa6.66□□□□□ -1.34
SMG6-205ENST00000570659 E7ENX8 843 aa6.66□□□□□ -1.34
SMG6-205ENST00000570659 H0YIG0 161 aa6.66□□□□□ -1.34
SMG6-205ENST00000570659 H7C0C1 242 aa6.66□□□□□ -1.34
SMG6-205ENST00000570659 MYO1CO00159 1063 aa6.66□□□□□ -1.34
SMG6-205ENST00000570659 CHST10O43529 356 aa6.66□□□□□ -1.34
SMG6-205ENST00000570659 OR2J2O76002 312 aa6.66□□□□□ -1.34
SMG6-205ENST00000570659 MATN4O95460 622 aa6.66□□□□□ -1.34
SMG6-205ENST00000570659 CNOT4O95628 575 aaKnown RBP6.66□□□□□ -1.34
SMG6-205ENST00000570659 SLC16A8O95907 504 aa6.66□□□□□ -1.34
SMG6-205ENST00000570659 F12P00748 615 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms