RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 ZNF860A6NHJ4 632 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 MAP2K7O14733 419 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 DPM1O60762 260 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 KERAO60938 352 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 KLHL18O94889 574 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 HPP00738 406 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 SERPIND1P05546 499 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 C2P06681 752 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 C1GALT1C1LP0DN25 315 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 COX6A1P12074 109 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 GNAZP19086 355 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 ITGA3P26006 1051 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 HSPA7P48741 367 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 RGS1Q08116 209 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 Q0VFX4 171 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 HYAL2Q12891 473 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 SLBPQ14493 270 aaKnown RBP eCLIP12.33□□□□□ -0.44
CNOT1-220ENST00000569916 UAP1Q16222 522 aaPredicted RBP12.33□□□□□ -0.44
CNOT1-220ENST00000569916 FAAH2Q6GMR7 532 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 SLCO4C1Q6ZQN7 724 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 RBMXL3Q8N7X1 1067 aaKnown RBP12.33□□□□□ -0.44
CNOT1-220ENST00000569916 OR51Q1Q8NH59 317 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 STAG3L4Q8TBR4 150 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 KCTD4Q8WVF5 259 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 SLC44A1Q8WWI5 657 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 NXNL1Q96CM4 212 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 VPS50Q96JG6 964 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 SLC6A16Q9GZN6 736 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 CNOT10Q9H9A5 744 aaKnown RBP12.33□□□□□ -0.44
CNOT1-220ENST00000569916 NMRAL1Q9HBL8 299 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 DNAJC11Q9NVH1 559 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 GPRC5BQ9NZH0 403 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 MKL2Q9ULH7 1088 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 ACOT9Q9Y305 439 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 ASB1Q9Y576 335 aa12.33□□□□□ -0.44
CNOT1-220ENST00000569916 A0A087X1B8 175 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 LOC102723996A0A087X1L8 192 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 C4orf51C9J302 202 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 UBXN8O00124 270 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 PCDH17O14917 1159 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 GALR3O60755 368 aaPredicted RBP12.32□□□□□ -0.44
CNOT1-220ENST00000569916 PRAMEF4O60810 478 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 STK16O75716 305 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 SORBS2O94875 1100 aaKnown RBP12.32□□□□□ -0.44
CNOT1-220ENST00000569916 WISP1O95388 367 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 B3GALT4O96024 378 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 ALDOAP04075 364 aaKnown RBP12.32□□□□□ -0.44
CNOT1-220ENST00000569916 S100BP04271 92 aaPredicted RBP12.32□□□□□ -0.44
CNOT1-220ENST00000569916 ALPPP05187 535 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 HEXBP07686 556 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 ZNF888P0CJ79 500 aaPredicted RBP12.32□□□□□ -0.44
CNOT1-220ENST00000569916 ALOX12P18054 663 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 EPORP19235 508 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 XCR1P46094 333 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 SERPINB8P50452 374 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 EEF1A2Q05639 463 aaKnown RBP12.32□□□□□ -0.44
CNOT1-220ENST00000569916 HERC3Q15034 1050 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 RBBP5Q15291 538 aaKnown RBP12.32□□□□□ -0.44
CNOT1-220ENST00000569916 DEFB134Q4QY38 66 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 PRAMEF9Q5VWM5 478 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 TMEM205Q6UW68 189 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 CCDC91Q7Z6B0 441 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 PARP9Q8IXQ6 854 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.32□□□□□ -0.44
CNOT1-220ENST00000569916 LRRN4CLQ8ND94 238 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 TRPV3Q8NET8 790 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 UTP15Q8TED0 518 aaKnown RBP12.32□□□□□ -0.44
CNOT1-220ENST00000569916 CREB3L4Q8TEY5 395 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 UBTD2Q8WUN7 234 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 PAFAH2Q99487 392 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 VN1R1Q9GZP7 353 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 AICDAQ9GZX7 198 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 ZNF160Q9HCG1 818 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 COPG2Q9UBF2 871 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 NFU1Q9UMS0 254 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 SCN2AQ99250 2005 aa12.32□□□□□ -0.44
CNOT1-220ENST00000569916 UBR5O95071 2799 aaPredicted RBP12.31□□□□□ -0.44
CNOT1-220ENST00000569916 A0A096LPK6 155 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 IGHV1-45A0A0A0MS14 117 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 NSG1A0A0A6YYJ2 146 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 SUPT3HB4E1H0 165 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 CLGNO14967 610 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 KLHL41O60662 606 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 SUPT3HO75486 399 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 CYC1P08574 325 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 MTHFD2P13995 350 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 CXCR2P25025 360 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 MAGEA12P43365 314 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 CD97P48960 835 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 FOXK1P85037 733 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 PCOLCEQ15113 449 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 PDK4Q16654 411 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 SLC6A19Q695T7 634 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 JMJD6Q6NYC1 403 aaPredicted RBP12.31□□□□□ -0.44
CNOT1-220ENST00000569916 IGFL3Q6UXB1 125 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 TMIGD1Q6UXZ0 262 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 ABHD13Q7L211 337 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 NDUFAF7Q7L592 441 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 LRRC70Q7Z2Q7 622 aa12.31□□□□□ -0.44
CNOT1-220ENST00000569916 SNX31Q8N9S9 440 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms