RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 SPATA33Q96N06 139 aa4.42□□□□□ -1.7
CHD9-220ENST00000569794 SECISBP2Q96T21 854 aaKnown RBP4.42□□□□□ -1.7
CHD9-220ENST00000569794 ACOX2Q99424 681 aa4.42□□□□□ -1.7
CHD9-220ENST00000569794 RAD9AQ99638 391 aa4.42□□□□□ -1.7
CHD9-220ENST00000569794 CPNE1Q99829 537 aa4.42□□□□□ -1.7
CHD9-220ENST00000569794 ZNF559Q9BR84 538 aa4.42□□□□□ -1.7
CHD9-220ENST00000569794 RAB9BQ9NP90 201 aa4.42□□□□□ -1.7
CHD9-220ENST00000569794 DPP3Q9NY33 737 aa4.42□□□□□ -1.7
CHD9-220ENST00000569794 DBNLQ9UJU6 430 aaKnown RBP4.42□□□□□ -1.7
CHD9-220ENST00000569794 VDAC3Q9Y277 283 aa4.42□□□□□ -1.7
CHD9-220ENST00000569794 MRPL11Q9Y3B7 192 aaKnown RBP4.42□□□□□ -1.7
CHD9-220ENST00000569794 CHTOPQ9Y3Y2 248 aaKnown RBP4.42□□□□□ -1.7
CHD9-220ENST00000569794 HBS1LQ9Y450 684 aaKnown RBP4.42□□□□□ -1.7
CHD9-220ENST00000569794 MFHAS1Q9Y4C4 1052 aa4.42□□□□□ -1.7
CHD9-220ENST00000569794 TMEM184BQ9Y519 407 aaPredicted RBP4.42□□□□□ -1.7
CHD9-220ENST00000569794 ASTN2O75129 1339 aaPredicted RBP4.42□□□□□ -1.7
CHD9-220ENST00000569794 CGNL1Q0VF96 1302 aa4.42□□□□□ -1.7
CHD9-220ENST00000569794 KANSL1LA0AUZ9 987 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 ZNF587BE7ETH6 402 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 MAP2K7O14733 419 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 MAPK13O15264 365 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 EXTL3O43909 919 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 TSPAN1O60635 241 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 TOM1L1O75674 476 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 SURF6O75683 361 aaKnown RBP4.41□□□□□ -1.7
CHD9-220ENST00000569794 LUC7L3O95232 432 aaKnown RBP4.41□□□□□ -1.7
CHD9-220ENST00000569794 LIPFP07098 398 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 TFPIP10646 304 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 CLUP10909 449 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 CPA3P15088 417 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 RPA2P15927 270 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 ZNF18P17022 549 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 PTPN4P29074 926 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 STIP1P31948 543 aaKnown RBP4.41□□□□□ -1.7
CHD9-220ENST00000569794 RYKP34925 604 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 CCT6AP40227 531 aaKnown RBP4.41□□□□□ -1.7
CHD9-220ENST00000569794 ACTR3P61158 418 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 MAP2K1Q02750 393 aaPredicted RBP4.41□□□□□ -1.7
CHD9-220ENST00000569794 ARHGEF6Q15052 776 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 CARTPTQ16568 116 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 AADACL4Q5VUY2 407 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 PAPD4Q6PIY7 484 aaKnown RBP4.41□□□□□ -1.7
CHD9-220ENST00000569794 FIGLAQ6QHK4 219 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 FAM198BQ6UWH4 519 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 DPPA4Q7L190 304 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 GPR180Q86V85 440 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 SATL1Q86VE3 508 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 KLHDC8AQ8IYD2 350 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 ZNF611Q8N823 705 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 RASGEF1AQ8N9B8 481 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 TANKQ92844 425 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 ORAI1Q96D31 301 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 SLC41A2Q96JW4 573 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 RPGRIP1Q96KN7 1286 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 C3orf30Q96M34 536 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 SFXN2Q96NB2 322 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 ZNF570Q96NI8 536 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 PSKH2Q96QS6 385 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 CSF3RQ99062 836 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 FAM110AQ9BQ89 295 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 BARHL1Q9BZE3 327 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 ATG10Q9H0Y0 220 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 WNT5BQ9H1J7 359 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 CUEDC2Q9H467 287 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 RAD21L1Q9H4I0 556 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 KCNMB3Q9NPA1 279 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 GPR108Q9NPR9 543 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 PANK4Q9NVE7 773 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 RAB20Q9NX57 234 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 GDAP2Q9NXN4 497 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 GPR132Q9UNW8 380 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 MGAT4BQ9UQ53 548 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 ARHGEF40Q8TER5 1519 aa4.41□□□□□ -1.7
CHD9-220ENST00000569794 DUXAA6NLW8 204 aa4.4□□□□□ -1.71
CHD9-220ENST00000569794 K7EQM0 130 aa4.4□□□□□ -1.71
CHD9-220ENST00000569794 PRRG1O14668 218 aa4.4□□□□□ -1.71
CHD9-220ENST00000569794 MED7O43513 233 aa4.4□□□□□ -1.71
CHD9-220ENST00000569794 CXCL10P02778 98 aa4.4□□□□□ -1.71
CHD9-220ENST00000569794 UGT2B4P06133 528 aa4.4□□□□□ -1.71
CHD9-220ENST00000569794 S100A9P06702 114 aaKnown RBP4.4□□□□□ -1.71
CHD9-220ENST00000569794 FGF4P08620 206 aa4.4□□□□□ -1.71
CHD9-220ENST00000569794 RAB40ALP0C0E4 278 aa4.4□□□□□ -1.71
CHD9-220ENST00000569794 POLR2MP0CAP2 368 aa4.4□□□□□ -1.71
CHD9-220ENST00000569794 ANXA8P13928 327 aa4.4□□□□□ -1.71
CHD9-220ENST00000569794 MYL6BP14649 208 aa4.4□□□□□ -1.71
CHD9-220ENST00000569794 DDX5P17844 614 aaKnown RBP4.4□□□□□ -1.71
CHD9-220ENST00000569794 CD22P20273 847 aa4.4□□□□□ -1.71
CHD9-220ENST00000569794 RDXP35241 583 aaKnown RBP4.4□□□□□ -1.71
CHD9-220ENST00000569794 GMPSP49915 693 aaPredicted RBP4.4□□□□□ -1.71
CHD9-220ENST00000569794 ASCL1P50553 236 aa4.4□□□□□ -1.71
CHD9-220ENST00000569794 CNN1P51911 297 aaKnown RBP4.4□□□□□ -1.71
CHD9-220ENST00000569794 POLR2LP62875 67 aaKnown RBP4.4□□□□□ -1.71
CHD9-220ENST00000569794 SLC1A5Q15758 541 aa4.4□□□□□ -1.71
CHD9-220ENST00000569794 PDK4Q16654 411 aa4.4□□□□□ -1.71
CHD9-220ENST00000569794 SGO1Q5FBB7 561 aa4.4□□□□□ -1.71
CHD9-220ENST00000569794 GCNT6Q5T4J0 391 aa4.4□□□□□ -1.71
CHD9-220ENST00000569794 ANXA8L1Q5VT79 327 aa4.4□□□□□ -1.71
CHD9-220ENST00000569794 PRAMEF7Q5VXH5 474 aa4.4□□□□□ -1.71
CHD9-220ENST00000569794 CLEC2AQ6UVW9 174 aa4.4□□□□□ -1.71
CHD9-220ENST00000569794 PQLC2Q6ZP29 291 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms