RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 SGK494L7N484 410 aa12.39□□□□□ -0.43
SPG7-221ENST00000569720 EIF3HO15372 352 aaKnown RBP eCLIP12.39□□□□□ -0.437e-7■■■□□ 16.9
SPG7-221ENST00000569720 SEC31AO94979 1220 aaKnown RBP12.39□□□□□ -0.43
SPG7-221ENST00000569720 MLYCDO95822 493 aa12.39□□□□□ -0.43
SPG7-221ENST00000569720 PGAM1P18669 254 aa12.39□□□□□ -0.43
SPG7-221ENST00000569720 IL10P22301 178 aa12.39□□□□□ -0.43
SPG7-221ENST00000569720 TNFRSF8P28908 595 aa12.39□□□□□ -0.43
SPG7-221ENST00000569720 SKP1P63208 163 aa12.39□□□□□ -0.43
SPG7-221ENST00000569720 ACTN3Q08043 901 aaPredicted RBP12.39□□□□□ -0.43
SPG7-221ENST00000569720 NAE1Q13564 534 aa12.39□□□□□ -0.43
SPG7-221ENST00000569720 EXT1Q16394 746 aa12.39□□□□□ -0.43
SPG7-221ENST00000569720 ZNF766Q5HY98 468 aa12.39□□□□□ -0.43
SPG7-221ENST00000569720 CAPN13Q6MZZ7 669 aaPredicted RBP12.39□□□□□ -0.43
SPG7-221ENST00000569720 LCTLQ6UWM7 567 aa12.39□□□□□ -0.43
SPG7-221ENST00000569720 LANCL3Q6ZV70 420 aa12.39□□□□□ -0.43
SPG7-221ENST00000569720 SLC26A11Q86WA9 606 aa12.39□□□□□ -0.43
SPG7-221ENST00000569720 TBC1D19Q8N5T2 526 aa12.39□□□□□ -0.43
SPG7-221ENST00000569720 C2CD4AQ8NCU7 369 aaPredicted RBP12.39□□□□□ -0.43
SPG7-221ENST00000569720 M1APQ8TC57 530 aa12.39□□□□□ -0.43
SPG7-221ENST00000569720 SLC13A3Q8WWT9 602 aa12.39□□□□□ -0.43
SPG7-221ENST00000569720 TM4SF19Q96DZ7 209 aa12.39□□□□□ -0.43
SPG7-221ENST00000569720 HAUS8Q9BT25 410 aa12.39□□□□□ -0.43
SPG7-221ENST00000569720 NAT9Q9BTE0 207 aa12.39□□□□□ -0.43
SPG7-221ENST00000569720 ATG10Q9H0Y0 220 aa12.39□□□□□ -0.43
SPG7-221ENST00000569720 KCNK13Q9HB14 408 aa12.39□□□□□ -0.43
SPG7-221ENST00000569720 MTRF1LQ9UGC7 380 aaKnown RBP12.39□□□□□ -0.43
SPG7-221ENST00000569720 ADAMTS6Q9UKP5 1117 aa12.39□□□□□ -0.43
SPG7-221ENST00000569720 FEZF1A0PJY2 475 aa12.38□□□□□ -0.43
SPG7-221ENST00000569720 CCL21O00585 134 aa12.38□□□□□ -0.43
SPG7-221ENST00000569720 TTC4O95801 387 aa12.38□□□□□ -0.43
SPG7-221ENST00000569720 CDH1P12830 882 aa12.38□□□□□ -0.43
SPG7-221ENST00000569720 EFNA3P52797 238 aa12.38□□□□□ -0.43
SPG7-221ENST00000569720 CASP6P55212 293 aa12.38□□□□□ -0.43
SPG7-221ENST00000569720 ART3Q13508 389 aa12.38□□□□□ -0.43
SPG7-221ENST00000569720 CRYMQ14894 314 aa12.38□□□□□ -0.43
SPG7-221ENST00000569720 HERC3Q15034 1050 aa12.38□□□□□ -0.43
SPG7-221ENST00000569720 MEP1AQ16819 746 aa12.38□□□□□ -0.43
SPG7-221ENST00000569720 ACER2Q5QJU3 275 aa12.38□□□□□ -0.43
SPG7-221ENST00000569720 RNASEH2BQ5TBB1 312 aaKnown RBP12.38□□□□□ -0.43
SPG7-221ENST00000569720 NIPAL1Q6NVV3 410 aa12.38□□□□□ -0.43
SPG7-221ENST00000569720 WDR93Q6P2C0 686 aa12.38□□□□□ -0.43
SPG7-221ENST00000569720 PRSS41Q7RTY9 318 aa12.38□□□□□ -0.43
SPG7-221ENST00000569720 ANKRD37Q7Z713 158 aa12.38□□□□□ -0.43
SPG7-221ENST00000569720 MFSD9Q8NBP5 474 aa12.38□□□□□ -0.43
SPG7-221ENST00000569720 MOCOSQ96EN8 888 aa12.38□□□□□ -0.43
SPG7-221ENST00000569720 NDNQ99608 321 aa12.38□□□□□ -0.43
SPG7-221ENST00000569720 MACROD1Q9BQ69 325 aa12.38□□□□□ -0.43
SPG7-221ENST00000569720 UTP23Q9BRU9 249 aaKnown RBP12.38□□□□□ -0.43
SPG7-221ENST00000569720 SGPP1Q9BX95 441 aa12.38□□□□□ -0.43
SPG7-221ENST00000569720 TRIM54Q9BYV2 358 aa12.38□□□□□ -0.43
SPG7-221ENST00000569720 PCDHGB6Q9Y5F9 930 aa12.38□□□□□ -0.43
SPG7-221ENST00000569720 SLC22A7Q9Y694 548 aa12.38□□□□□ -0.43
SPG7-221ENST00000569720 LCMT2O60294 686 aaKnown RBP12.37□□□□□ -0.43
SPG7-221ENST00000569720 RDH16O75452 317 aa12.37□□□□□ -0.43
SPG7-221ENST00000569720 CCR8P51685 355 aa12.37□□□□□ -0.43
SPG7-221ENST00000569720 TAS2R50P59544 299 aa12.37□□□□□ -0.43
SPG7-221ENST00000569720 GUCY2DQ02846 1103 aa12.37□□□□□ -0.43
SPG7-221ENST00000569720 DHX9Q08211 1270 aaKnown RBP12.37□□□□□ -0.43
SPG7-221ENST00000569720 NSDHLQ15738 373 aa12.37□□□□□ -0.43
SPG7-221ENST00000569720 SFT2D3Q587I9 215 aa12.37□□□□□ -0.43
SPG7-221ENST00000569720 SPANXN3Q5MJ09 141 aa12.37□□□□□ -0.43
SPG7-221ENST00000569720 TEX35Q5T0J7 233 aa12.37□□□□□ -0.43
SPG7-221ENST00000569720 H3F3CQ6NXT2 135 aa12.37□□□□□ -0.43
SPG7-221ENST00000569720 PAPD4Q6PIY7 484 aaKnown RBP12.37□□□□□ -0.43
SPG7-221ENST00000569720 PAQR3Q6TCH7 311 aa12.37□□□□□ -0.43
SPG7-221ENST00000569720 MBOAT1Q6ZNC8 495 aa12.37□□□□□ -0.43
SPG7-221ENST00000569720 KIAA0408Q6ZU52 694 aa12.37□□□□□ -0.43
SPG7-221ENST00000569720 SPNS2Q8IVW8 549 aa12.37□□□□□ -0.43
SPG7-221ENST00000569720 SRRM1Q8IYB3 904 aaKnown RBP12.37□□□□□ -0.43
SPG7-221ENST00000569720 PDIK1LQ8N165 341 aa12.37□□□□□ -0.43
SPG7-221ENST00000569720 BEST3Q8N1M1 668 aa12.37□□□□□ -0.43
SPG7-221ENST00000569720 AGGF1Q8N302 714 aaeCLIP12.37□□□□□ -0.43
SPG7-221ENST00000569720 HORMAD2Q8N7B1 307 aa12.37□□□□□ -0.43
SPG7-221ENST00000569720 KCT2Q8NC54 265 aa12.37□□□□□ -0.43
SPG7-221ENST00000569720 PLPP5Q8NEB5 264 aa12.37□□□□□ -0.43
SPG7-221ENST00000569720 ATL1Q8WXF7 558 aa12.37□□□□□ -0.43
SPG7-221ENST00000569720 LINGO1Q96FE5 620 aa12.37□□□□□ -0.43
SPG7-221ENST00000569720 OR1F2PQ96R84 312 aa12.37□□□□□ -0.43
SPG7-221ENST00000569720 LPAR4Q99677 370 aa12.37□□□□□ -0.43
SPG7-221ENST00000569720 MMP25Q9NPA2 562 aa12.37□□□□□ -0.43
SPG7-221ENST00000569720 SH2B3Q9UQQ2 575 aa12.37□□□□□ -0.43
SPG7-221ENST00000569720 NAALAD2Q9Y3Q0 740 aa12.37□□□□□ -0.43
SPG7-221ENST00000569720 KLF2Q9Y5W3 355 aaPredicted RBP12.37□□□□□ -0.43
SPG7-221ENST00000569720 APCP25054 2843 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 NDUFS4O43181 175 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 OR1F1O43749 312 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 CD46P15529 392 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 NPPBP16860 134 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 JAK1P23458 1154 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 MST1P26927 711 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 EEF1DP29692 281 aaKnown RBP12.36□□□□□ -0.43
SPG7-221ENST00000569720 CA7P43166 264 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 RPL21P46778 160 aaKnown RBP12.36□□□□□ -0.43
SPG7-221ENST00000569720 AP1S2P56377 157 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 ARL4CP56559 192 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 IL2P60568 153 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 SNRPNP63162 240 aaKnown RBP12.36□□□□□ -0.43
SPG7-221ENST00000569720 PMP22Q01453 160 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 PDAP1Q13442 181 aaKnown RBP12.36□□□□□ -0.43
SPG7-221ENST00000569720 PWP1Q13610 501 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms