RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 KRT78Q8N1N4 520 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 SNX31Q8N9S9 440 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 ANKRD53Q8N9V6 530 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 TTLQ8NG68 377 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 ZCCHC10Q8TBK6 192 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 MOCOSQ96EN8 888 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 GPR78Q96P69 363 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 CRB3Q9BUF7 120 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 SLC25A23Q9BV35 468 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 TXLNGYQ9BZA5 131 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 PITHD1Q9GZP4 211 aaPredicted RBP13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 EHD1Q9H4M9 534 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 NT5DC2Q9H857 520 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 C3orf18Q9UK00 162 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 G3BP2Q9UN86 482 aaKnown RBP13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 TP53TG5Q9Y2B4 290 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 TRIM49D1C9J1S8 452 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 SOCS6O14544 535 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 FFAR3O14843 346 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 GPR42O15529 346 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 SNRPAP09012 282 aaKnown RBP13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 COL6A2P12110 1019 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 MTHFD2P13995 350 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 ALOX12P18054 663 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 EMP2P54851 167 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 SKP1P63208 163 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 SLBPQ14493 270 aaKnown RBP eCLIP13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 SLC29A2Q14542 456 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 PDK4Q16654 411 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 SYT16Q17RD7 645 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 NIPAL1Q6NVV3 410 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 ADGRD1Q6QNK2 874 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 KIRREL2Q6UWL6 708 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 TMIGD1Q6UXZ0 262 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 ABHD13Q7L211 337 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 LRRC70Q7Z2Q7 622 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 PLD6Q8N2A8 252 aaKnown RBP13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 AFAP1L2Q8N4X5 818 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 CLEC1AQ8NC01 280 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 OR51Q1Q8NH59 317 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 UBTD2Q8WUN7 234 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 PTCD3Q96EY7 689 aaKnown RBP13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 SEC16BQ96JE7 1060 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 MLXIPLQ9NP71 852 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 ATP13A2Q9NQ11 1180 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 COPG2Q9UBF2 871 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 NAALAD2Q9Y3Q0 740 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 PCDHGB7Q9Y5F8 929 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 HEMK1Q9Y5R4 338 aaPredicted RBP13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 HS3ST3B1Q9Y662 390 aa13.09□□□□□ -0.31
HERPUD1-218ENST00000569569 A6NL46 340 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 IDSB3KWA1 339 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 K7EPI3 171 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 SGK494L7N484 410 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 PCDH17O14917 1159 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 KLK8O60259 260 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 KLHL41O60662 606 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 KLHL18O94889 574 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 BMP10O95393 424 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 HEXBP07686 556 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 SERPINA6P08185 405 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 RBP1P09455 135 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 MYBL2P10244 700 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 GFAPP14136 432 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 GSTM2P28161 218 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 GCAP28676 217 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 TNFRSF8P28908 595 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 CASP2P42575 452 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 SOX8P57073 446 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 MAT1AQ00266 395 aaKnown RBP13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 HYAL2Q12891 473 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 AIMP2Q13155 320 aaKnown RBP13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 LAPTM5Q13571 262 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 TBCCQ15814 346 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 HIST2H2ACQ16777 129 aaPredicted RBP13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 TSNAXIP1Q2TAA8 658 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 TUBB8Q3ZCM7 444 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 XKR6Q5GH73 641 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 HIST2H2AA3Q6FI13 130 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 ASB18Q6ZVZ8 466 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 PTRH1Q86Y79 214 aaKnown RBP13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 PDSS2Q86YH6 399 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 ZC3H7AQ8IWR0 971 aaKnown RBP13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 GSPT2Q8IYD1 628 aaKnown RBP13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 CNPY4Q8N129 248 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 GALNT16Q8N428 558 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 FDCSPQ8NFU4 85 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 UTP15Q8TED0 518 aaKnown RBP13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 CREB3L4Q8TEY5 395 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 MTBPQ96DY7 904 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 WDR34Q96EX3 536 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 CCDC77Q9BR77 488 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 EFCAB11Q9BUY7 163 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 SLC6A16Q9GZN6 736 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 ZNF358Q9NW07 568 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 GPR83Q9NYM4 423 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 OPTCQ9UBM4 332 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 FETUBQ9UGM5 382 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 ASB1Q9Y576 335 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms