RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 SLC6A11P48066 632 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 NRIP1P48552 1158 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 PLA2G16P53816 162 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 WNT3P56703 355 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 TBPL1P62380 186 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 CYP4F2P78329 520 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 GSTM4Q03013 218 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 SLBPQ14493 270 aaKnown RBP eCLIP8.44□□□□□ -1.06
LINC00558-201ENST00000569422 TCEA2Q15560 299 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 FNDC3BQ53EP0 1204 aaKnown RBP8.44□□□□□ -1.06
LINC00558-201ENST00000569422 ZNF805Q5CZA5 627 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 ZDHHC20Q5W0Z9 365 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 CPZQ66K79 652 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 OR2T5Q6IEZ7 315 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 KLHL35Q6PF15 583 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 TMC5Q6UXY8 1006 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 CALHM3Q86XJ0 350 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 NAGSQ8N159 534 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 TRAM1L1Q8N609 369 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 OR4A15Q8NGL6 344 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 OR2T29Q8NH02 315 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 NXPE3Q969Y0 559 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 TESCQ96BS2 214 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 ARMC5Q96C12 935 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 PPP1R14BQ96C90 147 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 NRBF2Q96F24 287 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 MRGPRX3Q96LB0 322 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 ZSCAN5AQ9BUG6 496 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 CERS4Q9HA82 394 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 GTF2A1LQ9UNN4 478 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 TESMINQ9Y4I5 508 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 KCNE2Q9Y6J6 123 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 COL4A6Q14031 1691 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 GBF1Q92538 1859 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 ARPC4-TTLL3A0A0A6YYG9 625 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 SCAMP1O15126 338 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 ABCB7O75027 752 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 ANGPTL1O95841 491 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 SOAT1P35610 550 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 DAPP51397 102 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 EMP3P54852 163 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 CD83Q01151 205 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 GAB1Q13480 694 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 DHCR24Q15392 516 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 PRPF38BQ5VTL8 546 aaKnown RBP8.43□□□□□ -1.06
LINC00558-201ENST00000569422 METTL11BQ5VVY1 283 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 XAF1Q6GPH4 301 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 ZZZ3Q8IYH5 903 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 MMP21Q8N119 569 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 SVOPLQ8N434 492 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 MRPL43Q8N983 215 aaKnown RBP8.43□□□□□ -1.06
LINC00558-201ENST00000569422 VN1R2Q8NFZ6 395 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 WDR20Q8TBZ3 569 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 ZNF480Q8WV37 535 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 CIDECQ96AQ7 238 aaPredicted RBP8.43□□□□□ -1.06
LINC00558-201ENST00000569422 DTNBP1Q96EV8 351 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 CCM2Q9BSQ5 444 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 ASPSCR1Q9BZE9 553 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 TRIM39Q9HCM9 518 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 PRDM8Q9NQV8 689 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 PAK1IP1Q9NWT1 392 aaPredicted RBP8.43□□□□□ -1.06
LINC00558-201ENST00000569422 SAGE1Q9NXZ1 904 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 ASIC5Q9NY37 505 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 ERVK-18Q9QC07 812 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 TMEFF2Q9UIK5 374 aaPredicted RBP8.43□□□□□ -1.06
LINC00558-201ENST00000569422 RUVBL1Q9Y265 456 aaKnown RBP8.43□□□□□ -1.06
LINC00558-201ENST00000569422 TMED5Q9Y3A6 229 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 MAP4K5Q9Y4K4 846 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 GMPPBQ9Y5P6 360 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 MICAL3Q7RTP6 2002 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 FAM221BA6H8Z2 402 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 PRR23AA6NEV1 266 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 SLC1A7O00341 560 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 TLL1O43897 1013 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 PCDH7O60245 1069 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 SLCO2B1O94956 709 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 HTR1AP08908 422 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 ETFAP13804 333 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 POU2F1P14859 743 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 MYOGP15173 224 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 HNF4AP41235 474 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 WASP42768 502 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 CREMQ03060 361 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 SRSF11Q05519 484 aaKnown RBP8.43□□□□□ -1.06
LINC00558-201ENST00000569422 NFE2L1Q14494 772 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 SMU1Q2TAY7 513 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 GGTA1PQ4G0N0 100 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 LIPJQ5W064 366 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 GPR153Q6NV75 609 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 PIWIL3Q7Z3Z3 882 aaKnown RBP8.43□□□□□ -1.06
LINC00558-201ENST00000569422 PTOV1Q86YD1 416 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 HIPK1Q86Z02 1210 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 DDHD1Q8NEL9 900 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 NODALQ96S42 347 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 MAN2B2Q9Y2E5 1009 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 SNX8Q9Y5X2 465 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 ZNF197O14709 1029 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 FADS2O95864 444 aaKnown RBP8.43□□□□□ -1.06
LINC00558-201ENST00000569422 BCL10O95999 233 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 STATHP02808 62 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms