RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 CELSR3Q9NYQ7 3312 aa12.17□□□□□ -0.46
CDT1-203ENST00000569140 A0A0G2JN53 185 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 ARGFXA6NJG6 315 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 EIF4E1BA6NMX2 242 aaKnown RBP12.16□□□□□ -0.46
CDT1-203ENST00000569140 STX16-NPEPL1H3BU86 382 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 STX16O14662 325 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 KLK8O60259 260 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 CNOT3O75175 753 aaKnown RBP12.16□□□□□ -0.46
CDT1-203ENST00000569140 SH3BGRLO75368 114 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 RDH16O75452 317 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 B3GALT4O96024 378 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 KRT4P19013 534 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 EPORP19235 508 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 CD22P20273 847 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 CCR10P46092 362 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 CCT5P48643 541 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 CCNG1P51959 295 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 STXBP1P61764 594 aaKnown RBP12.16□□□□□ -0.46
CDT1-203ENST00000569140 SNRPNP63162 240 aaKnown RBP12.16□□□□□ -0.46
CDT1-203ENST00000569140 SKP1P63208 163 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 OLR1P78380 273 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 CHAF1BQ13112 559 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 DSG2Q14126 1118 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 FAM53BQ14153 422 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 HERC3Q15034 1050 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 PCBP2Q15366 365 aaKnown RBP eCLIP12.16□□□□□ -0.46
CDT1-203ENST00000569140 NKG7Q16617 165 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 KRT71Q3SY84 523 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 VWA2Q5GFL6 755 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 FAAH2Q6GMR7 532 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 MRPL14Q6P1L8 145 aaKnown RBP12.16□□□□□ -0.46
CDT1-203ENST00000569140 MED27Q6P2C8 311 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 SRRM1Q8IYB3 904 aaKnown RBP12.16□□□□□ -0.46
CDT1-203ENST00000569140 MREGQ8N565 214 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 OR2Y1Q8NGV0 311 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 SNRNP27Q8WVK2 155 aaKnown RBP12.16□□□□□ -0.46
CDT1-203ENST00000569140 UBE2E3Q969T4 207 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 TM4SF19Q96DZ7 209 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 FAR2Q96K12 515 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 NSUN5Q96P11 429 aaKnown RBP12.16□□□□□ -0.46
CDT1-203ENST00000569140 CRB3Q9BUF7 120 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 SARGQ9BW04 601 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 RBCK1Q9BYM8 510 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 NOL11Q9H8H0 719 aaKnown RBP12.16□□□□□ -0.46
CDT1-203ENST00000569140 SEMA4BQ9NPR2 832 aaPredicted RBP12.16□□□□□ -0.46
CDT1-203ENST00000569140 ACSS2Q9NR19 701 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 ENAMQ9NRM1 1142 aa12.16□□□□□ -0.46
CDT1-203ENST00000569140 AHCTF1Q8WYP5 2266 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 H0YIG0 161 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 ERVH48-1M5A8F1 160 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 PEX12O00623 359 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 E2F3O00716 465 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 ERI3O43414 337 aaKnown RBP12.15□□□□□ -0.46
CDT1-203ENST00000569140 PRAMEF4O60810 478 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 KLF7O75840 302 aaPredicted RBP12.15□□□□□ -0.46
CDT1-203ENST00000569140 SUPT7LO94864 414 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 NSA2O95478 260 aaKnown RBP12.15□□□□□ -0.46
CDT1-203ENST00000569140 ALBP02768 609 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 ITGB2P05107 769 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 HEXBP07686 556 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 ZGLP1P0C6A0 271 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 FAM87AP0C7U9 286 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 MYL2P10916 166 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 ALOX12P18054 663 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 TSPAN8P19075 237 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 ATP5F1P24539 256 aaPredicted RBP12.15□□□□□ -0.46
CDT1-203ENST00000569140 PHEXP78562 749 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 KLC1Q07866 573 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 ATP1A4Q13733 1029 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 SSPNQ14714 243 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 CPSF6Q16630 551 aaKnown RBP eCLIP12.15□□□□□ -0.46
CDT1-203ENST00000569140 PRAMEF9Q5VWM5 478 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 TTC19Q6DKK2 380 aaPredicted RBP12.15□□□□□ -0.46
CDT1-203ENST00000569140 ADNP2Q6IQ32 1131 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 GRHL2Q6ISB3 625 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 RPS27LQ71UM5 84 aaKnown RBP12.15□□□□□ -0.46
CDT1-203ENST00000569140 AMER3Q8N944 861 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 STT3BQ8TCJ2 826 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 UTP15Q8TED0 518 aaKnown RBP12.15□□□□□ -0.46
CDT1-203ENST00000569140 APOBEC4Q8WW27 367 aaKnown RBP12.15□□□□□ -0.46
CDT1-203ENST00000569140 THAP4Q8WY91 577 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 CDK15Q96Q40 435 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 ROPN1BQ9BZX4 212 aaPredicted RBP12.15□□□□□ -0.46
CDT1-203ENST00000569140 FAM117AQ9C073 453 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 PITHD1Q9GZP4 211 aaPredicted RBP12.15□□□□□ -0.46
CDT1-203ENST00000569140 RHBGQ9H310 441 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 KLHL31Q9H511 634 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 NT5DC2Q9H857 520 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 WDR54Q9H977 334 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 COPS7BQ9H9Q2 264 aaPredicted RBP12.15□□□□□ -0.46
CDT1-203ENST00000569140 ROPN1Q9HAT0 212 aaPredicted RBP12.15□□□□□ -0.46
CDT1-203ENST00000569140 MKKSQ9NPJ1 570 aaPredicted RBP12.15□□□□□ -0.46
CDT1-203ENST00000569140 PCTPQ9UKL6 214 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 MAP4K5Q9Y4K4 846 aa12.15□□□□□ -0.46
CDT1-203ENST00000569140 FER1L5A0AVI2 2057 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 RGS16O15492 202 aaPredicted RBP12.14□□□□□ -0.47
CDT1-203ENST00000569140 CDC123O75794 336 aaPredicted RBP12.14□□□□□ -0.47
CDT1-203ENST00000569140 UMODP07911 640 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 SERPINA6P08185 405 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 SBK3P0C264 359 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms