RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	EIF2S1	P05198	315 aa	Known RBP	11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	ITIH1	P19827	911 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	CD82	P27701	267 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	RBMS1	P29558	406 aa	Known RBP	11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	ARRB2	P32121	409 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	ARFIP1	P53367	373 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	MAPK10	P53779	464 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	CYP4F2	P78329	520 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	GABRE	P78334	506 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	OCRL	Q01968	901 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	CSTF3	Q12996	717 aa	Known RBP	11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	DDX39B	Q13838	428 aa	Known RBP	11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	MUM1	Q2TAK8	710 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	FAM214A	Q32MH5	1076 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	TMEM35A	Q53FP2	167 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	WASHC2D	Q5SRD0	308 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	ABHD13	Q7L211	337 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	TMEM126B	Q8IUX1	230 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	OR4N4	Q8N0Y3	316 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	GBP7	Q8N8V2	638 aa	Predicted RBP	11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	SRFBP1	Q8NEF9	429 aa	Known RBP	11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	CREB3L4	Q8TEY5	395 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	CCT6B	Q92526	530 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	GAL3ST3	Q96A11	431 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	MVB12A	Q96EY5	273 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	CMTM7	Q96FZ5	175 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	SORT1	Q99523	831 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	SERPINI1	Q99574	410 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	NDC1	Q9BTX1	674 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	MS4A8	Q9BY19	250 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	SLC6A16	Q9GZN6	736 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	CCDC134	Q9H6E4	229 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	NMRK1	Q9NWW6	199 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	TRAF6	Q9Y4K3	522 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	PCDHGA7	Q9Y5G6	932 aa		11.45	□□□□□ -0.58
FANCA-231	ENST00000568626	CHD8	Q9HCK8	2581 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626		A0A088AWK7	358 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	SERTM1	A2A2V5	107 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	HYKK	A2RU49	373 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	LRIT2	A6NDA9	550 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	SLCO1B7	G3V0H7	640 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	P2RX6	O15547	441 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	ITM2A	O43736	263 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	CPNE3	O75131	537 aa	Known RBP	11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	DXO	O77932	396 aa	Known RBP	11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	SERPIND1	P05546	499 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	ZNF10	P21506	573 aa	Predicted RBP	11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	PTX3	P26022	381 aa	Predicted RBP	11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	MDH1	P40925	334 aa	Known RBP	11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	RPL14	P50914	215 aa	Known RBP	11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	CUL3	Q13618	768 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	FAM53B	Q14153	422 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	HKDC1	Q2TB90	917 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	ADPRM	Q3LIE5	342 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	CES4A	Q5XG92	561 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	TMEM214	Q6NUQ4	689 aa	Known RBP	11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	TRIM40	Q6P9F5	258 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	FOXR1	Q6PIV2	292 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	CHSY3	Q70JA7	882 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	VN1R5	Q7Z5H4	357 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	CRLF3	Q8IUI8	442 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	ZNF781	Q8N8C0	355 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	PROKR1	Q8TCW9	393 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	TWIST2	Q8WVJ9	160 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	KCNA7	Q96RP8	456 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	MTERF1	Q99551	399 aa	Known RBP	11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	SHCBP1L	Q9BZQ2	653 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	SLC7A5P2	Q9GIP4	190 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	SYNPO2L	Q9H987	977 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	ACTR5	Q9H9F9	607 aa	Predicted RBP	11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	TXLNG	Q9NUQ3	528 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	FAM53C	Q9NYF3	392 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	RUVBL1	Q9Y265	456 aa	Known RBP	11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	SLC22A7	Q9Y694	548 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	KNTC1	P50748	2209 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	KIF26B	Q2KJY2	2108 aa		11.44	□□□□□ -0.58
FANCA-231	ENST00000568626	SPEG	Q15772	3267 aa		11.43	□□□□□ -0.58
FANCA-231	ENST00000568626		A0A1W2PNU3	283 aa	Predicted RBP	11.43	□□□□□ -0.58
FANCA-231	ENST00000568626	MAGEB17	A8MXT2	336 aa		11.43	□□□□□ -0.58
FANCA-231	ENST00000568626	AGRP	O00253	132 aa		11.43	□□□□□ -0.58
FANCA-231	ENST00000568626	NVL	O15381	856 aa	Known RBP	11.43	□□□□□ -0.58
FANCA-231	ENST00000568626	ZNF749	O43361	778 aa		11.43	□□□□□ -0.58
FANCA-231	ENST00000568626	TNFSF15	O95150	251 aa		11.43	□□□□□ -0.58
FANCA-231	ENST00000568626	PDYN	P01213	254 aa		11.43	□□□□□ -0.58
FANCA-231	ENST00000568626	ETV5	P41161	510 aa		11.43	□□□□□ -0.58
FANCA-231	ENST00000568626	TSFM	P43897	325 aa	Known RBP	11.43	□□□□□ -0.58
FANCA-231	ENST00000568626	GCGR	P47871	477 aa		11.43	□□□□□ -0.58
FANCA-231	ENST00000568626	FOXA1	P55317	472 aa		11.43	□□□□□ -0.58
FANCA-231	ENST00000568626	RPS13	P62277	151 aa	Known RBP	11.43	□□□□□ -0.58
FANCA-231	ENST00000568626	GUCY1A3	Q02108	690 aa		11.43	□□□□□ -0.58
FANCA-231	ENST00000568626	CAMK2B	Q13554	666 aa		11.43	□□□□□ -0.58
FANCA-231	ENST00000568626	RTP5	Q14D33	572 aa		11.43	□□□□□ -0.58
FANCA-231	ENST00000568626	HERC3	Q15034	1050 aa		11.43	□□□□□ -0.58
FANCA-231	ENST00000568626	TCHHL1	Q5QJ38	904 aa	Predicted RBP	11.43	□□□□□ -0.58
FANCA-231	ENST00000568626	KHDRBS2	Q5VWX1	349 aa	Known RBP	11.43	□□□□□ -0.58
FANCA-231	ENST00000568626	CLEC6A	Q6EIG7	209 aa		11.43	□□□□□ -0.58
FANCA-231	ENST00000568626	ADNP2	Q6IQ32	1131 aa		11.43	□□□□□ -0.58
FANCA-231	ENST00000568626	RHBDD2	Q6NTF9	364 aa		11.43	□□□□□ -0.58
FANCA-231	ENST00000568626	PWWP2B	Q6NUJ5	590 aa		11.43	□□□□□ -0.58
FANCA-231	ENST00000568626	PRMT9	Q6P2P2	845 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms