RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 KCNJ11Q14654 390 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 TTLL9Q3SXZ7 439 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 CMPK2Q5EBM0 449 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 ACAD11Q709F0 780 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 PDSS2Q86YH6 399 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 CCDC71Q8IV32 467 aaPredicted RBP11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 REXO1L1PQ8IX06 675 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 LRRC56Q8IYG6 542 aaPredicted RBP11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 LRRC57Q8N9N7 239 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 FBXO15Q8NCQ5 510 aaPredicted RBP11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 MYRIPQ8NFW9 859 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 ATG4AQ8WYN0 398 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 PEX11GQ96HA9 241 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 SEC16BQ96JE7 1060 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 MACROD1Q9BQ69 325 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 FAM129AQ9BZQ8 928 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 IL22Q9GZX6 179 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 PLSCR2Q9NRY7 297 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 CRYL1Q9Y2S2 319 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 HRH3Q9Y5N1 445 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 DUSP10Q9Y6W6 482 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 FBN3Q75N90 2809 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 FAM237BA0A1B0GVD1 139 aa11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 TCRBV7S2A1N4TA0A589 114 aa11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 BTNL10A8MVZ5 291 aa11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 MIF4GDA9UHW6 222 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 FCHO1O14526 889 aa11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 KLK8O60259 260 aa11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 VAPBO95292 243 aa11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 IPO7O95373 1038 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 FHP07954 510 aa11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 SLC35G6P0C7Q6 338 aa11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 JAK1P23458 1154 aa11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 NMBRP28336 390 aa11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 RFC3P40938 356 aa11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 PMPCAQ10713 525 aa11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 FOXD4Q12950 439 aaPredicted RBP11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 OASLQ15646 514 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 CEBPEQ15744 281 aa11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 PEX26Q7Z412 305 aa11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 ASPGQ86U10 573 aa11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 SULF2Q8IWU5 870 aa11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 RPRMLQ8N4K4 120 aa11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 TC2NQ8N9U0 490 aa11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 ZFP62Q8NB50 900 aaPredicted RBP11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 KCT2Q8NC54 265 aa11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 C16orf52Q8NHV5 167 aa11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 TBC1D20Q96BZ9 403 aa11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 TCF12Q99081 682 aa11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 CCDC177Q9NQR7 707 aaPredicted RBP11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 DNAJB12Q9NXW2 375 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 GALPQ9UBC7 116 aa11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 ST6GALNAC2Q9UJ37 374 aa11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 AMFRQ9UKV5 643 aa11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 NAALAD2Q9Y3Q0 740 aa11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 SLC22A7Q9Y694 548 aa11.05□□□□□ -0.64
GTF3C1-209ENST00000568569 VPS13CQ709C8 3753 aa11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 FLNAP21333 2647 aaKnown RBP11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 ZNF860A6NHJ4 632 aa11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 AP3B1O00203 1094 aa11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 LIASO43766 372 aa11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 PEX1O43933 1283 aa11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 CTAG2O75638 210 aa11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 FOSL1P15407 271 aa11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 IMPA1P29218 277 aa11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 SKIV2L2P42285 1042 aaKnown RBP11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 NUP107P57740 925 aa11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 TBPL1P62380 186 aa11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 SKP1P63208 163 aa11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 HERC3Q15034 1050 aa11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 RPS6KA1Q15418 735 aa11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 ARMC10Q8N2F6 343 aa11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 CCDC89Q8N998 374 aa11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 OR5M3Q8NGP4 307 aa11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 SLC13A3Q8WWT9 602 aa11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 ASB11Q8WXH4 323 aa11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 TM4SF19Q96DZ7 209 aa11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 MFSD3Q96ES6 412 aa11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 FRMD8P1Q9BZ68 369 aaPredicted RBP11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 SLC6A16Q9GZN6 736 aa11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 PCBD2Q9H0N5 130 aa11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 GSX1Q9H4S2 264 aaPredicted RBP11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 EIF2B3Q9NR50 452 aaKnown RBP11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 DLL4Q9NR61 685 aa11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 PAK5Q9P286 719 aa11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 EDARQ9UNE0 448 aa11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 PACSIN2Q9UNF0 486 aaPredicted RBP11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 ZNF148Q9UQR1 794 aa11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 L3MBTL1Q9Y468 752 aa11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 EPN1Q9Y6I3 576 aaPredicted RBP11.04□□□□□ -0.64
GTF3C1-209ENST00000568569 SAGE2PA6NJ88 616 aa11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 GOLGA8KD6RF30 607 aa11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 GOLGA8TH3BQL2 631 aa11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 GFYI3L273 518 aa11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 ZBTB14O43829 449 aa11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 PDE9AO76083 593 aa11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 ENO3P13929 434 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 ETS1P14921 441 aa11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 OGNP20774 298 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 GRK3P35626 688 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms