RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 EEFSECP57772 596 aaKnown RBP6.77□□□□□ -1.33
SMG1-215ENST00000568239 STARD6P59095 220 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 MTAPQ13126 283 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 DPY19L1Q2PZI1 675 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 PUS10Q3MIT2 529 aaKnown RBP6.77□□□□□ -1.33
SMG1-215ENST00000568239 KHDRBS2Q5VWX1 349 aaKnown RBP6.77□□□□□ -1.33
SMG1-215ENST00000568239 GLYATQ6IB77 296 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 IZUMO2Q6UXV1 221 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 NRROSQ86YC3 692 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 FAM46DQ8NEK8 389 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 VPS37AQ8NEZ2 397 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 OR2T12Q8NG77 320 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 OR2L3Q8NG85 312 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 OR8J3Q8NGG0 315 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 STARD8Q92502 1023 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 NELL1Q92832 810 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 C11orf24Q96F05 449 aaPredicted RBP6.77□□□□□ -1.33
SMG1-215ENST00000568239 METTL2AQ96IZ6 378 aaKnown RBP6.77□□□□□ -1.33
SMG1-215ENST00000568239 NELL2Q99435 816 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 SEPHS2Q99611 448 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 SH3GL1Q99961 368 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 GSDMCQ9BYG8 508 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 KLHL25Q9H0H3 589 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 WASH6PQ9NQA3 447 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 SERHLQ9NQF3 203 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 MIEF1Q9NQG6 463 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 TAAR2Q9P1P5 351 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 ACTR3BQ9P1U1 418 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 PLPP1O14494 284 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 IL3P08700 152 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 CHRM5P08912 532 aaPredicted RBP6.76□□□□□ -1.33
SMG1-215ENST00000568239 C7P10643 843 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 ACPPP15309 386 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 POLR2CP19387 275 aaPredicted RBP6.76□□□□□ -1.33
SMG1-215ENST00000568239 CMPK1P30085 196 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 PEBP1P30086 187 aaKnown RBP6.76□□□□□ -1.33
SMG1-215ENST00000568239 MAPK12P53778 367 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 REEP5Q00765 189 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 EIF2B5Q13144 721 aaKnown RBP6.76□□□□□ -1.33
SMG1-215ENST00000568239 GPR18Q14330 331 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 FZD2Q14332 565 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 AASDHQ4L235 1098 aaPredicted RBP6.76□□□□□ -1.33
SMG1-215ENST00000568239 TBCELQ5QJ74 424 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 DEPDC1Q5TB30 811 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 KIAA1614Q5VZ46 1190 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 WASH2PQ6VEQ5 465 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 PRR23BQ6ZRT6 265 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 SLC9B2Q86UD5 537 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 TRIM73Q86UV7 250 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 PARGQ86W56 976 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 MSRB3Q8IXL7 192 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 CLEC4FQ8N1N0 589 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 METTL4Q8N3J2 472 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 C16orf78Q8WTQ4 265 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 NCLNQ969V3 563 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 FAM120BQ96EK7 910 aaKnown RBP6.76□□□□□ -1.33
SMG1-215ENST00000568239 FCRL1Q96LA6 429 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 FCRL4Q96PJ5 515 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 PKP2Q99959 881 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 C17orf62Q9BQA9 187 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 EFHD1Q9BUP0 239 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 PAIP1Q9H074 479 aaKnown RBP6.76□□□□□ -1.33
SMG1-215ENST00000568239 OR6C2Q9NZP2 312 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 APOBEC3BQ9UH17 382 aaKnown RBP6.76□□□□□ -1.33
SMG1-215ENST00000568239 DOLKQ9UPQ8 538 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 DGKBQ9Y6T7 804 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 ZDBF2Q9HCK1 2354 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 NCOR1O75376 2440 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 A0A096LPI6 279 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 PRSS51A0A1B0GVH4 220 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 DHRS12A0PJE2 317 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 OR6C74A6NCV1 312 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 EVPLLA8MZ36 301 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 B4DGG1 531 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 HAT1O14929 419 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 PPM1DO15297 605 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 YY2O15391 372 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 NDUFS4O43181 175 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 ZW10O43264 779 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 PRMT3O60678 531 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 TIPRLO75663 272 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 NTRK1P04629 796 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 PSMA4P25789 261 aaKnown RBP6.76□□□□□ -1.33
SMG1-215ENST00000568239 BIRC2Q13490 618 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 DUOXA1Q1HG43 343 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 RUNDC3AQ59EK9 446 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 GALNT18Q6P9A2 607 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 IYDQ6PHW0 289 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 AMIGO2Q86SJ2 522 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 TMEFF1Q8IYR6 380 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 MMP21Q8N119 569 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 LILRA2Q8N149 483 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 TBC1D19Q8N5T2 526 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 FAM110BQ8TC76 370 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 LRTOMTQ8WZ04 291 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 PPCDCQ96CD2 204 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 NSMCE2Q96MF7 247 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 HSPA12BQ96MM6 686 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 ZNF583Q96ND8 569 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms