RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 WDR54Q9H977 334 aa11.79□□□□□ -0.52
RNF40-211ENST00000567365 DCDC2Q9UHG0 476 aa11.79□□□□□ -0.52
RNF40-211ENST00000567365 PCTPQ9UKL6 214 aa11.79□□□□□ -0.52
RNF40-211ENST00000567365 PLAAQ9Y263 795 aa11.79□□□□□ -0.52
RNF40-211ENST00000567365 TSC22D4Q9Y3Q8 395 aa11.79□□□□□ -0.52
RNF40-211ENST00000567365 SCN3AQ9NY46 2000 aa11.79□□□□□ -0.52
RNF40-211ENST00000567365 MED13Q9UHV7 2174 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 C4orf51C9J302 202 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 C9J4A7 227 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 G3V2L1 256 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 H0YIG0 161 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 OR7A17O14581 309 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 CLGNO14967 610 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 CTIFO43310 598 aaKnown RBP11.78□□□□□ -0.52
RNF40-211ENST00000567365 PLIN3O60664 434 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 UGDHO60701 494 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 SMIM24O75264 130 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 CLEC3AO75596 197 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 C1QL1O75973 258 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 UMODP07911 640 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 SERPINA6P08185 405 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 SLC35G6P0C7Q6 338 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 KRT15P19012 456 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 EEF1DP29692 281 aaKnown RBP11.78□□□□□ -0.52
RNF40-211ENST00000567365 FOXL2P58012 376 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 RPS15P62841 145 aaKnown RBP11.78□□□□□ -0.52
RNF40-211ENST00000567365 MC1RQ01726 317 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 IRF8Q02556 426 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 CDC20Q12834 499 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 TRAF3Q13114 568 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 GTF2H2Q13888 395 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 UGT8Q16880 541 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 XKR6Q5GH73 641 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 GTF2H2CQ6P1K8 395 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 GOLGA7Q7Z5G4 137 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 METTL27Q8N6F8 245 aaPredicted RBP11.78□□□□□ -0.52
RNF40-211ENST00000567365 TEX9Q8N6V9 391 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 L3MBTL4Q8NA19 623 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 TRPV3Q8NET8 790 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 OR9A4Q8NGU2 314 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 OR2Y1Q8NGV0 311 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 UTP15Q8TED0 518 aaKnown RBP11.78□□□□□ -0.52
RNF40-211ENST00000567365 ZNF483Q8TF39 744 aaPredicted RBP11.78□□□□□ -0.52
RNF40-211ENST00000567365 PHF21BQ96EK2 531 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 SCYL1Q96KG9 808 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 NSUN5Q96P11 429 aaKnown RBP11.78□□□□□ -0.52
RNF40-211ENST00000567365 TGIF2Q9GZN2 237 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 KLHL31Q9H511 634 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 ZNF304Q9HCX3 659 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 IFT80Q9P2H3 777 aaPredicted RBP11.78□□□□□ -0.52
RNF40-211ENST00000567365 CTSFQ9UBX1 484 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 NDOR1Q9UHB4 597 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 ZNF225Q9UK10 706 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 CDC14AQ9UNH5 594 aa11.78□□□□□ -0.52
RNF40-211ENST00000567365 SPENQ96T58 3664 aaKnown RBP11.78□□□□□ -0.52
RNF40-211ENST00000567365 NUP210LQ5VU65 1888 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 A0A0A6YYC8 382 aaPredicted RBP11.77□□□□□ -0.53
RNF40-211ENST00000567365 A0A1B0GTL3 188 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 TLDC2A0PJX2 215 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 LRIT2A6NDA9 550 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 H0YIV9 168 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 I3L1I5 382 aaPredicted RBP11.77□□□□□ -0.53
RNF40-211ENST00000567365 NDUFS4O43181 175 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 GALR3O60755 368 aaPredicted RBP11.77□□□□□ -0.53
RNF40-211ENST00000567365 H2AFYO75367 372 aaKnown RBP11.77□□□□□ -0.53
RNF40-211ENST00000567365 KATNA1O75449 491 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 ITGB2P05107 769 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 CD63P08962 238 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 PIM1P11309 404 aaPredicted RBP11.77□□□□□ -0.53
RNF40-211ENST00000567365 KRT4P19013 534 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 ATP5F1P24539 256 aaPredicted RBP11.77□□□□□ -0.53
RNF40-211ENST00000567365 HNRNPH1P31943 449 aaKnown RBP11.77□□□□□ -0.53
RNF40-211ENST00000567365 PIK3CGP48736 1102 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 EFNA3P52797 238 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 PRKAA2P54646 552 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 HERVK_113P63132 956 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 RGS1Q08116 209 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 LAPTM5Q13571 262 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 SLC9A5Q14940 896 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 NDUFA9Q16795 377 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 UNC50Q53HI1 259 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 ATP1A1-AS1Q5TC04 95 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 MLIPQ5VWP3 458 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 LIPJQ5W064 366 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 GRHL2Q6ISB3 625 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 MED25Q71SY5 747 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 C4orf33Q8N1A6 199 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 KRT78Q8N1N4 520 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 TBC1D19Q8N5T2 526 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 BANPQ8N9N5 519 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 TTLQ8NG68 377 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 OR7G3Q8NG95 312 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 OR52B6Q8NGF0 335 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 STT3BQ8TCJ2 826 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 ZNF473Q8WTR7 871 aaKnown RBP11.77□□□□□ -0.53
RNF40-211ENST00000567365 L3HYPDHQ96EM0 354 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 ZIM3Q96PE6 472 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 TMEM237Q96Q45 408 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 NTMT1Q9BV86 223 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 ERVK-6Q9BXR3 956 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms