RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 FAM198BQ6UWH4 519 aa12.82□□□□□ -0.36
CLK3-218ENST00000566926 SBSNQ6UWP8 590 aa12.82□□□□□ -0.36
CLK3-218ENST00000566926 TTLL10Q6ZVT0 673 aa12.82□□□□□ -0.36
CLK3-218ENST00000566926 ADCK2Q7Z695 626 aa12.82□□□□□ -0.36
CLK3-218ENST00000566926 PAQR7Q86WK9 346 aa12.82□□□□□ -0.36
CLK3-218ENST00000566926 C17orf64Q86WR6 236 aa12.82□□□□□ -0.36
CLK3-218ENST00000566926 CRLF3Q8IUI8 442 aa12.82□□□□□ -0.36
CLK3-218ENST00000566926 LRRC56Q8IYG6 542 aaPredicted RBP12.82□□□□□ -0.36
CLK3-218ENST00000566926 LRRC34Q8IZ02 419 aa12.82□□□□□ -0.36
CLK3-218ENST00000566926 ANKS4BQ8N8V4 417 aa12.82□□□□□ -0.36
CLK3-218ENST00000566926 PDPRQ8NCN5 879 aa12.82□□□□□ -0.36
CLK3-218ENST00000566926 RERGQ96A58 199 aaPredicted RBP12.82□□□□□ -0.36
CLK3-218ENST00000566926 IP6K3Q96PC2 410 aa12.82□□□□□ -0.36
CLK3-218ENST00000566926 HAUS8Q9BT25 410 aa12.82□□□□□ -0.36
CLK3-218ENST00000566926 C1QTNF3Q9BXJ4 246 aa12.82□□□□□ -0.36
CLK3-218ENST00000566926 CUTCQ9NTM9 273 aa12.82□□□□□ -0.36
CLK3-218ENST00000566926 MAN2B2Q9Y2E5 1009 aa12.82□□□□□ -0.36
CLK3-218ENST00000566926 STK38LQ9Y2H1 464 aa12.82□□□□□ -0.36
CLK3-218ENST00000566926 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.82□□□□□ -0.36
CLK3-218ENST00000566926 SPTA1P02549 2419 aa12.82□□□□□ -0.36
CLK3-218ENST00000566926 NUP210LQ5VU65 1888 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 HYKKA2RU49 373 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 CDC7O00311 574 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 HSPA4LO95757 839 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 ALBP02768 609 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 EIF2S1P05198 315 aaKnown RBP12.81□□□□□ -0.36
CLK3-218ENST00000566926 CAPN1P07384 714 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 FAM87AP0C7U9 286 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 MTHFD2P13995 350 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 GRK3P35626 688 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 GCGRP47871 477 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 PIK3CGP48736 1102 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 POLE2P56282 527 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 RPS18P62269 152 aaKnown RBP12.81□□□□□ -0.36
CLK3-218ENST00000566926 NAE1Q13564 534 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 RCN2Q14257 317 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 PHKG1Q16816 387 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 PPP1R3AQ16821 1122 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 MUM1Q2TAK8 710 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 GARNL3Q5VVW2 1013 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 SULT1C3Q6IMI6 304 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 LCN10Q6JVE6 187 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 PRMT9Q6P2P2 845 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 FBXO42Q6P3S6 717 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 LCTLQ6UWM7 567 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 RAB43Q86YS6 212 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 AFAP1L2Q8N4X5 818 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 EXD3Q8N9H8 876 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 FKBP10Q96AY3 582 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 FBXL8Q96CD0 374 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 TRIM55Q9BYV6 548 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 ATG10Q9H0Y0 220 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 FGFR1OP2Q9NVK5 253 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 CD274Q9NZQ7 290 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.81□□□□□ -0.36
CLK3-218ENST00000566926 CDC14AQ9UNH5 594 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 KCNMB2Q9Y691 235 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 SCN3AQ9NY46 2000 aa12.81□□□□□ -0.36
CLK3-218ENST00000566926 SLCO1B7G3V0H7 640 aa12.8□□□□□ -0.36
CLK3-218ENST00000566926 H0YGG7 62 aa12.8□□□□□ -0.36
CLK3-218ENST00000566926 UBXN8O00124 270 aa12.8□□□□□ -0.36
CLK3-218ENST00000566926 MLYCDO95822 493 aa12.8□□□□□ -0.36
CLK3-218ENST00000566926 ONECUT2O95948 504 aa12.8□□□□□ -0.36
CLK3-218ENST00000566926 IGHEP01854 428 aa12.8□□□□□ -0.36
CLK3-218ENST00000566926 CTSBP07858 339 aa12.8□□□□□ -0.36
CLK3-218ENST00000566926 ANXA5P08758 320 aa12.8□□□□□ -0.36
CLK3-218ENST00000566926 FOLR3P41439 243 aa12.8□□□□□ -0.36
CLK3-218ENST00000566926 NAGLUP54802 743 aa12.8□□□□□ -0.36
CLK3-218ENST00000566926 ARF3P61204 181 aaPredicted RBP12.8□□□□□ -0.36
CLK3-218ENST00000566926 RPS15AP62244 130 aaKnown RBP12.8□□□□□ -0.36
CLK3-218ENST00000566926 YBX1P67809 324 aaKnown RBP12.8□□□□□ -0.36
CLK3-218ENST00000566926 KCNAB2Q13303 367 aa12.8□□□□□ -0.36
CLK3-218ENST00000566926 SSPNQ14714 243 aa12.8□□□□□ -0.36
CLK3-218ENST00000566926 SETDB1Q15047 1291 aa12.8□□□□□ -0.36
CLK3-218ENST00000566926 PFKFB4Q16877 469 aa12.8□□□□□ -0.36
CLK3-218ENST00000566926 ATP1A1-AS1Q5TC04 95 aa12.8□□□□□ -0.36
CLK3-218ENST00000566926 FRMPD2BQ6IN97 320 aa12.8□□□□□ -0.36
CLK3-218ENST00000566926 FAM47EQ6ZV65 393 aa12.8□□□□□ -0.36
CLK3-218ENST00000566926 APLFQ8IW19 511 aaPredicted RBP12.8□□□□□ -0.36
CLK3-218ENST00000566926 WDR75Q8IWA0 830 aaKnown RBP12.8□□□□□ -0.36
CLK3-218ENST00000566926 TBC1D19Q8N5T2 526 aa12.8□□□□□ -0.36
CLK3-218ENST00000566926 PTGR2Q8N8N7 351 aaPredicted RBP12.8□□□□□ -0.36
CLK3-218ENST00000566926 PIWIL2Q8TC59 973 aaKnown RBP12.8□□□□□ -0.36
CLK3-218ENST00000566926 UBTD2Q8WUN7 234 aa12.8□□□□□ -0.36
CLK3-218ENST00000566926 THAP11Q96EK4 314 aa12.8□□□□□ -0.36
CLK3-218ENST00000566926 MVB12AQ96EY5 273 aa12.8□□□□□ -0.36
CLK3-218ENST00000566926 FAR2Q96K12 515 aa12.8□□□□□ -0.36
CLK3-218ENST00000566926 GATA5Q9BWX5 397 aaPredicted RBP12.8□□□□□ -0.36
CLK3-218ENST00000566926 SGPP1Q9BX95 441 aa12.8□□□□□ -0.36
CLK3-218ENST00000566926 UNKQ9C0B0 810 aaKnown RBP12.8□□□□□ -0.36
CLK3-218ENST00000566926 ILKAPQ9H0C8 392 aaPredicted RBP12.8□□□□□ -0.36
CLK3-218ENST00000566926 SLC25A18Q9H1K4 315 aa12.8□□□□□ -0.36
CLK3-218ENST00000566926 KLHL14Q9P2G3 628 aa12.8□□□□□ -0.36
CLK3-218ENST00000566926 HAO1Q9UJM8 370 aa12.8□□□□□ -0.36
CLK3-218ENST00000566926 TLN1Q9Y490 2541 aaKnown RBP12.8□□□□□ -0.36
CLK3-218ENST00000566926 LOC105369274A0A096LPK9 316 aa12.79□□□□□ -0.36
CLK3-218ENST00000566926 IGKV1-8A0A0C4DH67 115 aa12.79□□□□□ -0.36
CLK3-218ENST00000566926 LOC102723532A0A0G2JNH3 316 aa12.79□□□□□ -0.36
CLK3-218ENST00000566926 MKRN2OSH3BPM6 223 aa12.79□□□□□ -0.36
CLK3-218ENST00000566926 H7BY64 318 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms