RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 FRG1Q14331 258 aaKnown RBP17.27■□□□□ 0.36
USB1-213ENST00000566292 FASTKD3Q14CZ7 662 aaKnown RBP17.27■□□□□ 0.36
USB1-213ENST00000566292 INAQ16352 499 aa17.27■□□□□ 0.36
USB1-213ENST00000566292 PPP1R3AQ16821 1122 aa17.27■□□□□ 0.36
USB1-213ENST00000566292 BTBD16Q32M84 506 aa17.27■□□□□ 0.36
USB1-213ENST00000566292 ABHD17BQ5VST6 288 aa17.27■□□□□ 0.36
USB1-213ENST00000566292 ZNF787Q6DD87 383 aa17.27■□□□□ 0.36
USB1-213ENST00000566292 PLAG1Q6DJT9 500 aa17.27■□□□□ 0.36
USB1-213ENST00000566292 ATL1Q8WXF7 558 aa17.27■□□□□ 0.36
USB1-213ENST00000566292 NEIL2Q969S2 332 aa17.27■□□□□ 0.36
USB1-213ENST00000566292 PEX11GQ96HA9 241 aa17.27■□□□□ 0.36
USB1-213ENST00000566292 RUNDC3BQ96NL0 473 aa17.27■□□□□ 0.36
USB1-213ENST00000566292 TRIM31Q9BZY9 425 aa17.27■□□□□ 0.36
USB1-213ENST00000566292 LANCL2Q9NS86 450 aa17.27■□□□□ 0.36
USB1-213ENST00000566292 MYO7BQ6PIF6 2116 aa17.26■□□□□ 0.35
USB1-213ENST00000566292 CTAGE15A4D2H0 777 aa17.26■□□□□ 0.35
USB1-213ENST00000566292 PABPN1LA6NDY0 278 aaKnown RBP17.26■□□□□ 0.35
USB1-213ENST00000566292 CDC123O75794 336 aaPredicted RBP17.26■□□□□ 0.35
USB1-213ENST00000566292 B3GALT4O96024 378 aa17.26■□□□□ 0.35
USB1-213ENST00000566292 AGTR2P50052 363 aa17.26■□□□□ 0.35
USB1-213ENST00000566292 ZNF33BQ06732 778 aa17.26■□□□□ 0.35
USB1-213ENST00000566292 MGAT5Q09328 741 aa17.26■□□□□ 0.35
USB1-213ENST00000566292 PWP1Q13610 501 aa17.26■□□□□ 0.35
USB1-213ENST00000566292 ZNF460Q14592 562 aa17.26■□□□□ 0.35
USB1-213ENST00000566292 HERC3Q15034 1050 aa17.26■□□□□ 0.35
USB1-213ENST00000566292 FCRLBQ6BAA4 426 aa17.26■□□□□ 0.35
USB1-213ENST00000566292 H3F3CQ6NXT2 135 aa17.26■□□□□ 0.35
USB1-213ENST00000566292 CTAGE6Q86UF2 777 aa17.26■□□□□ 0.35
USB1-213ENST00000566292 ZC3HC1Q86WB0 502 aaKnown RBP17.26■□□□□ 0.35
USB1-213ENST00000566292 FBXO36Q8NEA4 188 aa17.26■□□□□ 0.35
USB1-213ENST00000566292 PLPP5Q8NEB5 264 aa17.26■□□□□ 0.35
USB1-213ENST00000566292 SLC5A11Q8WWX8 675 aa17.26■□□□□ 0.35
USB1-213ENST00000566292 NR4A3Q92570 626 aa17.26■□□□□ 0.35
USB1-213ENST00000566292 TSLPQ969D9 159 aa17.26■□□□□ 0.35
USB1-213ENST00000566292 TSNARE1Q96NA8 513 aa17.26■□□□□ 0.35
USB1-213ENST00000566292 STMN3Q9NZ72 180 aa17.26■□□□□ 0.35
USB1-213ENST00000566292 MOCS1Q9NZB8 636 aa17.26■□□□□ 0.35
USB1-213ENST00000566292 ZFATQ9P243 1243 aa17.26■□□□□ 0.35
USB1-213ENST00000566292 SAR1BQ9Y6B6 198 aa17.26■□□□□ 0.35
USB1-213ENST00000566292 FAM95CA0A1B0GW59 222 aa17.25■□□□□ 0.35
USB1-213ENST00000566292 OR5H15A6NDH6 313 aa17.25■□□□□ 0.35
USB1-213ENST00000566292 A8MUI8 341 aa17.25■□□□□ 0.35
USB1-213ENST00000566292 CDC7O00311 574 aa17.25■□□□□ 0.35
USB1-213ENST00000566292 FANCGO15287 622 aa17.25■□□□□ 0.35
USB1-213ENST00000566292 GALR3O60755 368 aaPredicted RBP17.25■□□□□ 0.35
USB1-213ENST00000566292 SERPIND1P05546 499 aa17.25■□□□□ 0.35
USB1-213ENST00000566292 STSP08842 583 aa17.25■□□□□ 0.35
USB1-213ENST00000566292 ALOX12P18054 663 aa17.25■□□□□ 0.35
USB1-213ENST00000566292 SAT1P21673 171 aa17.25■□□□□ 0.35
USB1-213ENST00000566292 DCTP40126 519 aa17.25■□□□□ 0.35
USB1-213ENST00000566292 SCTRP47872 440 aa17.25■□□□□ 0.35
USB1-213ENST00000566292 KCNK10P57789 538 aa17.25■□□□□ 0.35
USB1-213ENST00000566292 SRSF11Q05519 484 aaKnown RBP17.25■□□□□ 0.35
USB1-213ENST00000566292 PDIA2Q13087 525 aaKnown RBP17.25■□□□□ 0.35
USB1-213ENST00000566292 CSHL1Q14406 222 aa17.25■□□□□ 0.35
USB1-213ENST00000566292 SFT2D3Q587I9 215 aa17.25■□□□□ 0.35
USB1-213ENST00000566292 STRA8Q7Z7C7 330 aa17.25■□□□□ 0.35
USB1-213ENST00000566292 NT5CQ8TCD5 201 aa17.25■□□□□ 0.35
USB1-213ENST00000566292 OR1F2PQ96R84 312 aa17.25■□□□□ 0.35
USB1-213ENST00000566292 NPAS2Q99743 824 aa17.25■□□□□ 0.35
USB1-213ENST00000566292 NAPGQ99747 312 aaPredicted RBP17.25■□□□□ 0.35
USB1-213ENST00000566292 NPEPPSL1A6NEC2 478 aa17.24■□□□□ 0.35
USB1-213ENST00000566292 E7ESA3 106 aa17.24■□□□□ 0.35
USB1-213ENST00000566292 CCDC188H7C350 402 aa17.24■□□□□ 0.35
USB1-213ENST00000566292 CHST10O43529 356 aa17.24■□□□□ 0.35
USB1-213ENST00000566292 PRAMEF2O60811 474 aa17.24■□□□□ 0.35
USB1-213ENST00000566292 ZNF888P0CJ79 500 aaPredicted RBP17.24■□□□□ 0.35
USB1-213ENST00000566292 IL10P22301 178 aa17.24■□□□□ 0.35
USB1-213ENST00000566292 MST1P26927 711 aa17.24■□□□□ 0.35
USB1-213ENST00000566292 RPL21P46778 160 aaKnown RBP17.24■□□□□ 0.35
USB1-213ENST00000566292 TAS2R39P59534 338 aa17.24■□□□□ 0.35
USB1-213ENST00000566292 OLR1P78380 273 aa17.24■□□□□ 0.35
USB1-213ENST00000566292 REEP5Q00765 189 aa17.24■□□□□ 0.35
USB1-213ENST00000566292 ABRAXAS2Q15018 415 aa17.24■□□□□ 0.35
USB1-213ENST00000566292 NSDHLQ15738 373 aa17.24■□□□□ 0.35
USB1-213ENST00000566292 DEFB134Q4QY38 66 aa17.24■□□□□ 0.35
USB1-213ENST00000566292 PAPD4Q6PIY7 484 aaKnown RBP17.24■□□□□ 0.35
USB1-213ENST00000566292 THOC6Q86W42 341 aaKnown RBP17.24■□□□□ 0.35
USB1-213ENST00000566292 BEST3Q8N1M1 668 aa17.24■□□□□ 0.35
USB1-213ENST00000566292 ANKRD53Q8N9V6 530 aa17.24■□□□□ 0.35
USB1-213ENST00000566292 M1APQ8TC57 530 aa17.24■□□□□ 0.35
USB1-213ENST00000566292 UTP15Q8TED0 518 aaKnown RBP17.24■□□□□ 0.35
USB1-213ENST00000566292 KCNK13Q9HB14 408 aa17.24■□□□□ 0.35
USB1-213ENST00000566292 TEKT2Q9UIF3 430 aa17.24■□□□□ 0.35
USB1-213ENST00000566292 ZFP69BQ9UJL9 534 aa17.24■□□□□ 0.35
USB1-213ENST00000566292 EFCAB8A8MWE9 144 aa17.23■□□□□ 0.35
USB1-213ENST00000566292 MAGEB17A8MXT2 336 aa17.23■□□□□ 0.35
USB1-213ENST00000566292 MAN1A2O60476 641 aa17.23■□□□□ 0.35
USB1-213ENST00000566292 RASAL1O95294 804 aa17.23■□□□□ 0.35
USB1-213ENST00000566292 FHP07954 510 aa17.23■□□□□ 0.35
USB1-213ENST00000566292 AHRP35869 848 aa17.23■□□□□ 0.35
USB1-213ENST00000566292 ST13P50502 369 aaKnown RBP17.23■□□□□ 0.35
USB1-213ENST00000566292 RGS1Q08116 209 aa17.23■□□□□ 0.35
USB1-213ENST00000566292 HYAL2Q12891 473 aa17.23■□□□□ 0.35
USB1-213ENST00000566292 USP10Q14694 798 aaKnown RBP17.23■□□□□ 0.35
USB1-213ENST00000566292 EXT1Q16394 746 aa17.23■□□□□ 0.35
USB1-213ENST00000566292 ACER2Q5QJU3 275 aa17.23■□□□□ 0.35
USB1-213ENST00000566292 TMPRSS11BQ86T26 416 aa17.23■□□□□ 0.35
USB1-213ENST00000566292 CRLF3Q8IUI8 442 aa17.23■□□□□ 0.35
USB1-213ENST00000566292 CEP97Q8IW35 865 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms