RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 ZNF282Q9UDV7 671 aaPredicted RBP13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 BSNQ9UPA5 3926 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 PCSK5Q92824 1860 aa13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 IGLV3-12A0A075B6K2 115 aa13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 A0A0A6YYC8 382 aaPredicted RBP13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 TLDC2A0PJX2 215 aa13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 LRRC14BA6NHZ5 514 aa13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 I3L1I5 382 aaPredicted RBP13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 K7EPI3 171 aa13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 PEX12O00623 359 aa13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 CLGNO14967 610 aa13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 IGHEP01854 428 aa13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 UMODP07911 640 aa13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 SLC35G6P0C7Q6 338 aa13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 AHRP35869 848 aa13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 AVPR1BP47901 424 aa13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 FOXL2P58012 376 aa13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 PWP1Q13610 501 aa13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 ATP1A4Q13733 1029 aa13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 DSG2Q14126 1118 aa13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 PCBP2Q15366 365 aaKnown RBP eCLIP13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 TMEM214Q6NUQ4 689 aaKnown RBP13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 SH2D5Q6ZV89 423 aa13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 LCA5Q86VQ0 697 aa13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 C9orf43Q8TAL5 461 aaPredicted RBP13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 MIEF2Q96C03 454 aa13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 WDR34Q96EX3 536 aa13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 YIPF2Q9BWQ6 316 aa13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 TRIM55Q9BYV6 548 aa13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 EHD1Q9H4M9 534 aa13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 SOX17Q9H6I2 414 aaPredicted RBP13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 CTSFQ9UBX1 484 aa13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 ZFP69BQ9UJL9 534 aa13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 MRPS2Q9Y399 296 aaKnown RBP13.13□□□□□ -0.31
HERPUD1-210ENST00000565966 CNTRLQ7Z7A1 2325 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 B8ZZF3 427 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 H0YIG0 161 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 H2AFYO75367 372 aaKnown RBP13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 DNAJB5O75953 348 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 SIX3O95343 332 aaPredicted RBP13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 NSA2O95478 260 aaKnown RBP13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 GSTA1P08263 222 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 ZGLP1P0C6A0 271 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 KRT15P19012 456 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 CD22P20273 847 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 MMP11P24347 488 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 CXCR2P25025 360 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 CCL11P51671 97 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 PCDH1Q08174 1060 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 IFFO1Q0D2I5 559 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 NFATC3Q12968 1075 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 CHAF1BQ13112 559 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 DOC2AQ14183 400 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 E2F2Q14209 437 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 SLBPQ14493 270 aaKnown RBP eCLIP13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 RBBP5Q15291 538 aaKnown RBP13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 VWA2Q5GFL6 755 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 XKR6Q5GH73 641 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 CPZQ66K79 652 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 TCTN3Q6NUS6 607 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 MRGPREQ86SM8 312 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 TMEM151BQ8IW70 566 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 TEX9Q8N6V9 391 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 PTGR2Q8N8N7 351 aaPredicted RBP13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 AMER3Q8N944 861 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 ANKRD53Q8N9V6 530 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 KCT2Q8NC54 265 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 PHF21BQ96EK2 531 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 MOCOSQ96EN8 888 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 PTCD3Q96EY7 689 aaKnown RBP13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 FER1L6-AS2Q96M78 137 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 ROPN1BQ9BZX4 212 aaPredicted RBP13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 NT5DC2Q9H857 520 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 ROPN1Q9HAT0 212 aaPredicted RBP13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 MKKSQ9NPJ1 570 aaPredicted RBP13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 RRAGDQ9NQL2 400 aaPredicted RBP13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 ZNF71Q9NQZ8 489 aaPredicted RBP13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 SEMA3GQ9NS98 782 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 P4HTMQ9NXG6 502 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 COPG2Q9UBF2 871 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 TRPC4Q9UBN4 977 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 TMCO1Q9UM00 188 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 MAP4K5Q9Y4K4 846 aa13.12□□□□□ -0.31
HERPUD1-210ENST00000565966 CFAP46Q8IYW2 2715 aa13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 STX16-NPEPL1H3BU86 382 aa13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 AGPSO00116 658 aa13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 E2F3O00716 465 aa13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 STX16O14662 325 aa13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 NDUFS4O43181 175 aa13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 SMIM24O75264 130 aa13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 EPB42P16452 691 aa13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 CASP2P42575 452 aa13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 IRF8Q02556 426 aa13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 KLC1Q07866 573 aa13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 RGS1Q08116 209 aa13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 CHIT1Q13231 466 aa13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 TBCCQ15814 346 aa13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 LACTB2Q53H82 288 aaPredicted RBP13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 METTL2BQ6P1Q9 378 aaKnown RBP13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 SHISA6Q6ZSJ9 500 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms