RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 AGPSO00116 658 aa13.2□□□□□ -0.3
CX3CL1-204ENST00000565912 SOX1O00570 391 aaPredicted RBP13.2□□□□□ -0.3
CX3CL1-204ENST00000565912 HEXBP07686 556 aa13.2□□□□□ -0.3
CX3CL1-204ENST00000565912 FOXN2P32314 431 aa13.2□□□□□ -0.3
CX3CL1-204ENST00000565912 MAGEA2P43356 314 aa13.2□□□□□ -0.3
CX3CL1-204ENST00000565912 HADHBP55084 474 aaKnown RBP13.2□□□□□ -0.3
CX3CL1-204ENST00000565912 UFM1P61960 85 aa13.2□□□□□ -0.3
CX3CL1-204ENST00000565912 PRRT3Q5FWE3 981 aa13.2□□□□□ -0.3
CX3CL1-204ENST00000565912 OR5T2Q8NGG2 359 aa13.2□□□□□ -0.3
CX3CL1-204ENST00000565912 OR10Q1Q8NGQ4 319 aa13.2□□□□□ -0.3
CX3CL1-204ENST00000565912 NTPCRQ9BSD7 190 aaKnown RBP13.2□□□□□ -0.3
CX3CL1-204ENST00000565912 BCO2Q9BYV7 579 aa13.2□□□□□ -0.3
CX3CL1-204ENST00000565912 SLC29A3Q9BZD2 475 aa13.2□□□□□ -0.3
CX3CL1-204ENST00000565912 PTGES2Q9H7Z7 377 aa13.2□□□□□ -0.3
CX3CL1-204ENST00000565912 SIX2Q9NPC8 291 aa13.2□□□□□ -0.3
CX3CL1-204ENST00000565912 SLC2A4RGQ9NR83 387 aa13.2□□□□□ -0.3
CX3CL1-204ENST00000565912 DKK3Q9UBP4 350 aa13.2□□□□□ -0.3
CX3CL1-204ENST00000565912 MLXQ9UH92 298 aa13.2□□□□□ -0.3
CX3CL1-204ENST00000565912 GLS2Q9UI32 602 aa13.2□□□□□ -0.3
CX3CL1-204ENST00000565912 IFT52Q9Y366 437 aa13.2□□□□□ -0.3
CX3CL1-204ENST00000565912 A0A1B0GVI7 797 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 HTR3EA5X5Y0 456 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 CCL5P13501 91 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 HSD3B2P26439 372 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 PTCHD3Q3KNS1 767 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 SLC25A25Q6KCM7 469 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 AGTRAPQ6RW13 159 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 SSX6Q7RTT6 188 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 TMED4Q7Z7H5 227 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 OR52B2Q96RD2 323 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 ZNF717Q9BY31 904 aaPredicted RBP13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 C14orf166Q9Y224 244 aaKnown RBP13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 FARSAQ9Y285 508 aaKnown RBP13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 KCTD3Q9Y597 815 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 PCDHB3Q9Y5E6 796 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 TEX13CA0A0J9YWL9 993 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 TLX2O43763 284 aaPredicted RBP13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 DIRAS1O95057 198 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 WDR45BQ5MNZ6 344 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 ZNF227Q86WZ6 799 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 MFSD2AQ8NA29 543 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 HSPBAP1Q96EW2 488 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 CMKLR1Q99788 373 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 FXYD6-FXYD2A0A087WZ82 144 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 A0A0U1RQF3 1178 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 SOX14O95416 240 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 FHP07954 510 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 LHCGRP22888 699 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 ZNF280AP59817 542 aaPredicted RBP13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 C22orf39Q6P5X5 142 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 DLK2Q6UY11 383 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 TICAM1Q8IUC6 712 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 TSSK6Q9BXA6 273 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 FXYD6Q9H0Q3 95 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 ABCD2Q9UBJ2 740 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 FETUBQ9UGM5 382 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 ZDHHC2Q9UIJ5 367 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 SCML2Q9UQR0 700 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 PCDHB14Q9Y5E9 798 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 POLR2CP19387 275 aaPredicted RBP13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 CCND3P30281 292 aaPredicted RBP13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 IRF5Q13568 498 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 BRI3BPQ8WY22 251 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 RNF11Q9Y3C5 154 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 AKAP12Q02952 1782 aa13.19□□□□□ -0.3
CX3CL1-204ENST00000565912 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 A0A1W2PPL8 197 aa13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 GLOD5A6NK44 160 aa13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 TULP2O00295 520 aa13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 RNF13O43567 381 aa13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 ARL6IP5O75915 188 aa13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 C6orf47O95873 294 aa13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 AHSGP02765 367 aa13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 GLP1RP43220 463 aa13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 DSG2Q14126 1118 aa13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 ZNF267Q14586 743 aaPredicted RBP13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 HERC3Q15034 1050 aa13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 TPRG1LQ5T0D9 272 aa13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 RBM20Q5T481 1227 aaKnown RBP13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 THAP6Q8TBB0 222 aa13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 DENND1AQ8TEH3 1009 aa13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 ASB9Q96DX5 294 aa13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 KCNH6Q9H252 994 aa13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 LMO7Q8WWI1 1683 aa13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 E2F3O00716 465 aa13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 AOC2O75106 756 aa13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 HTR1AP08908 422 aa13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 IFI30P13284 250 aa13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 PREPP48147 710 aa13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 CDH11P55287 796 aa13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 SEMA3AQ14563 771 aa13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 GPAT4Q86UL3 456 aa13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 KIAA1143Q96AT1 154 aaPredicted RBP13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 KLHDC7BQ96G42 594 aa13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 RBP7Q96R05 134 aa13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 TWNKQ96RR1 684 aa13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 WRAP73Q9P2S5 460 aaPredicted RBP13.18□□□□□ -0.3
CX3CL1-204ENST00000565912 TMED5Q9Y3A6 229 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms