RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 MAPK8P45983 427 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 RPA4Q13156 261 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 CRHR2Q13324 411 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 MED27Q6P2C8 311 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 SNX20Q7Z614 316 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 DEFB128Q7Z7B8 93 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 NOXA1Q86UR1 476 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 GEMIN6Q8WXD5 167 aaKnown RBP12.2□□□□□ -0.46
COMMD4-209ENST00000564068 SMIM14Q96QK8 99 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 MAPKAP1Q9BPZ7 522 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 UCK2Q9BZX2 261 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 ABCG2Q9UNQ0 655 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 SBK3P0C264 359 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 PRKACBP22694 351 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 VARS2Q5ST30 1063 aaKnown RBP12.2□□□□□ -0.46
COMMD4-209ENST00000564068 FAM92BQ6ZTR7 304 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 ARHGAP12Q8IWW6 846 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 UMODL1-AS1Q8N2C9 162 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 ZFP41Q8N8Y5 198 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 SOCS4Q8WXH5 440 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 ARMC5Q96C12 935 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 GINS4Q9BRT9 223 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 MND1Q9BWT6 205 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 INIPQ9NRY2 104 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 MAT2BQ9NZL9 334 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 HSPE1-MOB4S4R3N1 261 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 GPR39O43194 453 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 PRAMEF11O60813 436 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 IFNA7P01567 189 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 RETP07949 1114 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 CELP19835 753 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 HRH2P25021 359 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 RYKP34925 604 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 TCEA2Q15560 299 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 MTSS1LQ765P7 747 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 CHMP1BQ7LBR1 199 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 PIANPQ8IYJ0 282 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 FAM46DQ8NEK8 389 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 BRI3BPQ8WY22 251 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 RAD51AP1Q96B01 352 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 TMEM80Q96HE8 168 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 MAGEB10Q96LZ2 347 aaPredicted RBP12.19□□□□□ -0.46
COMMD4-209ENST00000564068 CCM2Q9BSQ5 444 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 TUBB1Q9H4B7 451 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 FAM155AB1AL88 458 aaPredicted RBP12.19□□□□□ -0.46
COMMD4-209ENST00000564068 GABARAPO95166 117 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 C1QAP02745 245 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 ATF6P18850 670 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 PCDH1Q08174 1060 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 AQP6Q13520 282 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 KLHL22Q53GT1 634 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 KDELC1Q6UW63 502 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 ZNF367Q7RTV3 350 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 SMG7Q92540 1137 aaKnown RBP12.19□□□□□ -0.46
COMMD4-209ENST00000564068 USP7Q93009 1102 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 UBE2E3Q969T4 207 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 OR51V1Q9H2C8 321 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 PPIL3Q9H2H8 161 aaKnown RBP12.19□□□□□ -0.46
COMMD4-209ENST00000564068 MAGIXQ9H6Y5 334 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 TMEM248Q9NWD8 314 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 GPRC5BQ9NZH0 403 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 HCN2Q9UL51 889 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 A0A0G2JN53 185 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 A0A1W2PQL4 384 aaPredicted RBP12.19□□□□□ -0.46
COMMD4-209ENST00000564068 CHST10O43529 356 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 LDB2O43679 373 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 TNFSF8P32971 234 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 VEGFBP49765 207 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 MAZP56270 477 aaKnown RBP12.19□□□□□ -0.46
COMMD4-209ENST00000564068 ATAD3CQ5T2N8 411 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 C9orf64Q5T6V5 341 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 ADGRD2Q7Z7M1 963 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 LYSMD2Q8IV50 215 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 GALNT6Q8NCL4 622 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 AKAP1Q92667 903 aaKnown RBP eCLIP12.19□□□□□ -0.46
COMMD4-209ENST00000564068 QRFPRQ96P65 431 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 C16orf70Q9BSU1 422 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 AMBRA1Q9C0C7 1298 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 RANGRFQ9HD47 186 aaPredicted RBP12.19□□□□□ -0.46
COMMD4-209ENST00000564068 ABCD2Q9UBJ2 740 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 USP3Q9Y6I4 520 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 ADAMTS7Q9UKP4 1686 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 A0A1W2PQ09 198 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 BCHEP06276 602 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 RPS17P08708 135 aaKnown RBP12.19□□□□□ -0.46
COMMD4-209ENST00000564068 PRKAR2AP13861 404 aaKnown RBP12.19□□□□□ -0.46
COMMD4-209ENST00000564068 JUNBP17275 347 aaPredicted RBP12.19□□□□□ -0.46
COMMD4-209ENST00000564068 ATAT1Q5SQI0 421 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 NPAS3Q8IXF0 933 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 SLC9A6Q92581 669 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 GTF2H4Q92759 462 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 CNDP2Q96KP4 475 aaKnown RBP12.19□□□□□ -0.46
COMMD4-209ENST00000564068 EGLN2Q96KS0 407 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 DOHHQ9BU89 302 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 SLC29A3Q9BZD2 475 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 SPO11Q9Y5K1 396 aa12.19□□□□□ -0.46
COMMD4-209ENST00000564068 CEP290O15078 2479 aa12.18□□□□□ -0.46
COMMD4-209ENST00000564068 TRAV19A0A0A6YYK7 116 aa12.18□□□□□ -0.46
COMMD4-209ENST00000564068 H1F0P07305 194 aaKnown RBP12.18□□□□□ -0.46
COMMD4-209ENST00000564068 CYP2A6P11509 494 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms