RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 STOX2Q9P2F5 926 aaPredicted RBP12.61□□□□□ -0.39
USB1-207ENST00000563149 ANKMY1Q9P2S6 941 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 MBD1Q9UIS9 605 aaPredicted RBP12.61□□□□□ -0.39
USB1-207ENST00000563149 TRIM17Q9Y577 477 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 TRAV19A0A0A6YYK7 116 aa12.6□□□□□ -0.39
USB1-207ENST00000563149 ARHGEF33A8MVX0 844 aa12.6□□□□□ -0.39
USB1-207ENST00000563149 TMEM229AB2RXF0 380 aa12.6□□□□□ -0.39
USB1-207ENST00000563149 M0R082 166 aa12.6□□□□□ -0.39
USB1-207ENST00000563149 ZNF197O14709 1029 aa12.6□□□□□ -0.39
USB1-207ENST00000563149 UPK1BO75841 260 aa12.6□□□□□ -0.39
USB1-207ENST00000563149 RPLP0P05388 317 aaKnown RBP12.6□□□□□ -0.39
USB1-207ENST00000563149 TIA1P31483 386 aaKnown RBP eCLIP12.6□□□□□ -0.39
USB1-207ENST00000563149 TMED10P49755 219 aaKnown RBP12.6□□□□□ -0.39
USB1-207ENST00000563149 CRYBA2P53672 197 aa12.6□□□□□ -0.39
USB1-207ENST00000563149 OLR1P78380 273 aa12.6□□□□□ -0.39
USB1-207ENST00000563149 CYP4F8P98187 520 aa12.6□□□□□ -0.39
USB1-207ENST00000563149 ZNF45Q02386 682 aa12.6□□□□□ -0.39
USB1-207ENST00000563149 FCHO2Q0JRZ9 810 aa12.6□□□□□ -0.39
USB1-207ENST00000563149 PPIGQ13427 754 aaKnown RBP eCLIP12.6□□□□□ -0.391e-8■□□□□ 8.5
USB1-207ENST00000563149 NAE1Q13564 534 aa12.6□□□□□ -0.39
USB1-207ENST00000563149 TIGD6Q17RP2 521 aa12.6□□□□□ -0.39
USB1-207ENST00000563149 MICAQ29983 383 aa12.6□□□□□ -0.39
USB1-207ENST00000563149 INAVAQ3KP66 663 aa12.6□□□□□ -0.39
USB1-207ENST00000563149 SPOUT1Q5T280 376 aaKnown RBP12.6□□□□□ -0.39
USB1-207ENST00000563149 GPR65Q8IYL9 337 aa12.6□□□□□ -0.39
USB1-207ENST00000563149 ZNF557Q8N988 423 aaPredicted RBP12.6□□□□□ -0.39
USB1-207ENST00000563149 KBTBD8Q8NFY9 601 aa12.6□□□□□ -0.39
USB1-207ENST00000563149 OR10G2Q8NGC3 310 aa12.6□□□□□ -0.39
USB1-207ENST00000563149 OR52N2Q8NGI0 321 aa12.6□□□□□ -0.39
USB1-207ENST00000563149 OR4A15Q8NGL6 344 aa12.6□□□□□ -0.39
USB1-207ENST00000563149 OR4C15Q8NGM1 316 aa12.6□□□□□ -0.39
USB1-207ENST00000563149 CDC26Q8NHZ8 85 aa12.6□□□□□ -0.39
USB1-207ENST00000563149 SPPL2AQ8TCT8 520 aa12.6□□□□□ -0.39
USB1-207ENST00000563149 GGHQ92820 318 aa12.6□□□□□ -0.39
USB1-207ENST00000563149 RPL3LQ92901 407 aaKnown RBP12.6□□□□□ -0.39
USB1-207ENST00000563149 UBE2FQ969M7 185 aa12.6□□□□□ -0.39
USB1-207ENST00000563149 TMEM38AQ9H6F2 299 aa12.6□□□□□ -0.39
USB1-207ENST00000563149 CCDC59Q9P031 241 aaKnown RBP12.6□□□□□ -0.39
USB1-207ENST00000563149 NDUFAF4Q9P032 175 aa12.6□□□□□ -0.39
USB1-207ENST00000563149 PCDHGA2Q9Y5H1 932 aa12.6□□□□□ -0.39
USB1-207ENST00000563149 PLK4O00444 970 aa12.59□□□□□ -0.39
USB1-207ENST00000563149 BNIP3LO60238 219 aa12.59□□□□□ -0.39
USB1-207ENST00000563149 KDM1AO60341 852 aa12.59□□□□□ -0.39
USB1-207ENST00000563149 GCM2O75603 506 aaPredicted RBP12.59□□□□□ -0.39
USB1-207ENST00000563149 IFNA14P01570 189 aa12.59□□□□□ -0.39
USB1-207ENST00000563149 EIF2S1P05198 315 aaKnown RBP12.59□□□□□ -0.39
USB1-207ENST00000563149 NUDT7P0C024 238 aa12.59□□□□□ -0.39
USB1-207ENST00000563149 LIPAP38571 399 aa12.59□□□□□ -0.39
USB1-207ENST00000563149 DDX39BQ13838 428 aaKnown RBP12.59□□□□□ -0.39
USB1-207ENST00000563149 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.59□□□□□ -0.39
USB1-207ENST00000563149 GPR153Q6NV75 609 aa12.59□□□□□ -0.39
USB1-207ENST00000563149 MED27Q6P2C8 311 aa12.59□□□□□ -0.39
USB1-207ENST00000563149 TSEN54Q7Z6J9 526 aaKnown RBP12.59□□□□□ -0.39
USB1-207ENST00000563149 ZNF605Q86T29 641 aa12.59□□□□□ -0.39
USB1-207ENST00000563149 SLC22A16Q86VW1 577 aa12.59□□□□□ -0.39
USB1-207ENST00000563149 RAVER1Q8IY67 606 aaKnown RBP12.59□□□□□ -0.39
USB1-207ENST00000563149 NAGSQ8N159 534 aa12.59□□□□□ -0.39
USB1-207ENST00000563149 OR7G3Q8NG95 312 aa12.59□□□□□ -0.39
USB1-207ENST00000563149 TMEM159Q96B96 161 aa12.59□□□□□ -0.39
USB1-207ENST00000563149 EFHD2Q96C19 240 aaPredicted RBP12.59□□□□□ -0.39
USB1-207ENST00000563149 HHIPL1Q96JK4 782 aa12.59□□□□□ -0.39
USB1-207ENST00000563149 KCNC2Q96PR1 638 aa12.59□□□□□ -0.39
USB1-207ENST00000563149 FEVQ99581 238 aa12.59□□□□□ -0.39
USB1-207ENST00000563149 ZSCAN5AQ9BUG6 496 aa12.59□□□□□ -0.39
USB1-207ENST00000563149 REEP4Q9H6H4 257 aa12.59□□□□□ -0.39
USB1-207ENST00000563149 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.59□□□□□ -0.39
USB1-207ENST00000563149 CD84Q9UIB8 345 aa12.59□□□□□ -0.39
USB1-207ENST00000563149 KLK4Q9Y5K2 254 aa12.59□□□□□ -0.39
USB1-207ENST00000563149 SLC5A10A0PJK1 596 aa12.58□□□□□ -0.39
USB1-207ENST00000563149 AGAP5A6NIR3 686 aa12.58□□□□□ -0.39
USB1-207ENST00000563149 LEFTY2O00292 366 aa12.58□□□□□ -0.39
USB1-207ENST00000563149 FOXE1O00358 373 aaPredicted RBP12.58□□□□□ -0.39
USB1-207ENST00000563149 TNFRSF21O75509 655 aa12.58□□□□□ -0.39
USB1-207ENST00000563149 VIPP01282 170 aa12.58□□□□□ -0.39
USB1-207ENST00000563149 HLA-FP30511 346 aa12.58□□□□□ -0.39
USB1-207ENST00000563149 SERPINB1P30740 379 aa12.58□□□□□ -0.39
USB1-207ENST00000563149 PRKCDQ05655 676 aa12.58□□□□□ -0.39
USB1-207ENST00000563149 GAB1Q13480 694 aa12.58□□□□□ -0.39
USB1-207ENST00000563149 KRR1Q13601 381 aaKnown RBP12.58□□□□□ -0.39
USB1-207ENST00000563149 DMC1Q14565 340 aa12.58□□□□□ -0.39
USB1-207ENST00000563149 SYT16Q17RD7 645 aa12.58□□□□□ -0.39
USB1-207ENST00000563149 SYTL3Q4VX76 610 aa12.58□□□□□ -0.39
USB1-207ENST00000563149 GCNT6Q5T4J0 391 aa12.58□□□□□ -0.39
USB1-207ENST00000563149 GAREM2Q75VX8 874 aa12.58□□□□□ -0.39
USB1-207ENST00000563149 DDX53Q86TM3 631 aaKnown RBP12.58□□□□□ -0.39
USB1-207ENST00000563149 NLRP8Q86W28 1048 aa12.58□□□□□ -0.39
USB1-207ENST00000563149 SLC30A8Q8IWU4 369 aa12.58□□□□□ -0.39
USB1-207ENST00000563149 HS6ST3Q8IZP7 471 aa12.58□□□□□ -0.39
USB1-207ENST00000563149 FBXO15Q8NCQ5 510 aaPredicted RBP12.58□□□□□ -0.39
USB1-207ENST00000563149 ZNF675Q8TD23 568 aa12.58□□□□□ -0.39
USB1-207ENST00000563149 FOPNLQ96NB1 174 aa12.58□□□□□ -0.39
USB1-207ENST00000563149 VPS35Q96QK1 796 aa12.58□□□□□ -0.39
USB1-207ENST00000563149 OR4K3Q96R72 315 aa12.58□□□□□ -0.39
USB1-207ENST00000563149 ZNF556Q9HAH1 456 aa12.58□□□□□ -0.39
USB1-207ENST00000563149 SH3BP4Q9P0V3 963 aa12.58□□□□□ -0.39
USB1-207ENST00000563149 TESMINQ9Y4I5 508 aa12.58□□□□□ -0.39
USB1-207ENST00000563149 PCDHGA3Q9Y5H0 932 aa12.58□□□□□ -0.39
USB1-207ENST00000563149 KCNE2Q9Y6J6 123 aa12.58□□□□□ -0.39
USB1-207ENST00000563149 MN1Q10571 1320 aaPredicted RBP12.58□□□□□ -0.4
USB1-207ENST00000563149 SH3D21A4FU49 640 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms