RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 ITGAXP20702 1163 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 HPDP32754 393 aaPredicted RBP9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 ETV4P43268 484 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 SLC18A1P54219 525 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 CLCQ05315 142 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 TRAF3Q13114 568 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 RBBP5Q15291 538 aaKnown RBP9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 ST3GAL2Q16842 350 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 NKAIN1Q4KMZ8 207 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 C10orf62Q5T681 223 aaPredicted RBP9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 LCN10Q6JVE6 187 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 NIPAL1Q6NVV3 410 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 MED27Q6P2C8 311 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 FAM198BQ6UWH4 519 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 OVCH1Q7RTY7 1134 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 HDXQ7Z353 690 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 VN1R5Q7Z5H4 357 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 KCT2Q8NC54 265 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 OR7G3Q8NG95 312 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 TCP10LQ8TDR4 215 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 FKBP10Q96AY3 582 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 TLCD1Q96CP7 247 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 MOCOSQ96EN8 888 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 SLC45A3Q96JT2 553 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 NSUN5Q96P11 429 aaKnown RBP9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 TMEM237Q96Q45 408 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 STMN4Q9H169 189 aaPredicted RBP9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 CHST8Q9H2A9 424 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 NOL11Q9H8H0 719 aaKnown RBP9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 ACTR8Q9H981 624 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 CLK4Q9HAZ1 481 aaKnown RBP9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 TMBIM4Q9HC24 238 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 SLC22A11Q9NSA0 550 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 KCND3Q9UK17 655 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 CROTQ9UKG9 612 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 STK38LQ9Y2H1 464 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 ATRXP46100 2492 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 LOC400499M0QZD8 3231 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 LRIT2A6NDA9 550 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 URADA6NGE7 173 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 K7ENP7 123 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 FOXE1O00358 373 aaPredicted RBP9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 TM9SF1O15321 606 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 NDUFS4O43181 175 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 TRIM13O60858 407 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 SPAG7O75391 227 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 SUPT7LO94864 414 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 MLYCDO95822 493 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 OTCP00480 354 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 LIFP15018 202 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 ALAS2P22557 587 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 F8A1P23610 371 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 DLSTP36957 453 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 PIK3CBP42338 1070 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 CCNG1P51959 295 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 ARFIP1P53367 373 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 CDH13P55290 713 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 RPS15P62841 145 aaKnown RBP9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 RGS1Q08116 209 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 ASPHQ12797 758 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 DNASE1L3Q13609 305 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 PCLAFQ15004 111 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 HERC3Q15034 1050 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 BROXQ5VW32 411 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 LIPMQ5VYY2 423 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 FAM199XQ6PEV8 388 aaPredicted RBP9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 INO80CQ6PI98 192 aaPredicted RBP9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 MED25Q71SY5 747 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 COX15Q7KZN9 410 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 HOMEZQ8IX15 550 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 OR52B6Q8NGF0 335 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 OR6Y1Q8NGX8 325 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 WDR20Q8TBZ3 569 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 UTP15Q8TED0 518 aaKnown RBP9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 ZNF473Q8WTR7 871 aaKnown RBP9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 CT55Q8WUE5 264 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 MR1Q95460 341 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 KIAA1143Q96AT1 154 aaPredicted RBP9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 REPS1Q96D71 796 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 NAF1Q96HR8 494 aaKnown RBP9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 FAM111AQ96PZ2 611 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 ZNF382Q96SR6 550 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 TGIF2Q9GZN2 237 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 AICDAQ9GZX7 198 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 DRC3Q9H069 523 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 IQCGQ9H095 443 aaKnown RBP9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 C12orf65Q9H3J6 166 aaKnown RBP9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 GSTO2Q9H4Y5 243 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 WDR54Q9H977 334 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 GPN2Q9H9Y4 310 aaPredicted RBP9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 ZNF304Q9HCX3 659 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 IRAK4Q9NWZ3 460 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 SLC17A7Q9P2U7 560 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 TRPS1Q9UHF7 1281 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 ZNF225Q9UK10 706 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 FARSAQ9Y285 508 aaKnown RBP9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 RNF11Q9Y3C5 154 aa9.15□□□□□ -0.94
RABGGTA-221ENST00000561055 PKD1L2Q7Z442 2459 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 DSPP15924 2871 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms