RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 SYDE1Q6ZW31 735 aaPredicted RBP15.28■□□□□ 0.04
SNX1-213ENST00000561026 STRA8Q7Z7C7 330 aa15.28■□□□□ 0.04
SNX1-213ENST00000561026 FJX1Q86VR8 437 aa15.28■□□□□ 0.04
SNX1-213ENST00000561026 ZNF740Q8NDX6 193 aa15.28■□□□□ 0.04
SNX1-213ENST00000561026 DNAJB8Q8NHS0 232 aa15.28■□□□□ 0.04
SNX1-213ENST00000561026 FAM45AQ8TCE6 357 aa15.28■□□□□ 0.04
SNX1-213ENST00000561026 LRRC39Q96DD0 335 aa15.28■□□□□ 0.04
SNX1-213ENST00000561026 CFAP36Q96G28 342 aa15.28■□□□□ 0.04
SNX1-213ENST00000561026 PEX11GQ96HA9 241 aa15.28■□□□□ 0.04
SNX1-213ENST00000561026 PDLIM5Q96HC4 596 aaKnown RBP15.28■□□□□ 0.04
SNX1-213ENST00000561026 ZNF354BQ96LW1 612 aa15.28■□□□□ 0.04
SNX1-213ENST00000561026 OLFM1Q99784 485 aa15.28■□□□□ 0.04
SNX1-213ENST00000561026 LANCL2Q9NS86 450 aa15.28■□□□□ 0.04
SNX1-213ENST00000561026 ABI3Q9P2A4 366 aa15.28■□□□□ 0.04
SNX1-213ENST00000561026 CHMP2BQ9UQN3 213 aa15.28■□□□□ 0.04
SNX1-213ENST00000561026 TEX264Q9Y6I9 313 aa15.28■□□□□ 0.04
SNX1-213ENST00000561026 SCN2AQ99250 2005 aa15.28■□□□□ 0.04
SNX1-213ENST00000561026 CPAMD8Q8IZJ3 1885 aa15.28■□□□□ 0.04
SNX1-213ENST00000561026 ZNF860A6NHJ4 632 aa15.27■□□□□ 0.04
SNX1-213ENST00000561026 GALR3O60755 368 aaPredicted RBP15.27■□□□□ 0.04
SNX1-213ENST00000561026 CDC123O75794 336 aaPredicted RBP15.27■□□□□ 0.04
SNX1-213ENST00000561026 GUCA1CO95843 209 aa15.27■□□□□ 0.04
SNX1-213ENST00000561026 MST1P26927 711 aa15.27■□□□□ 0.04
SNX1-213ENST00000561026 FRG1Q14331 258 aaKnown RBP15.27■□□□□ 0.04
SNX1-213ENST00000561026 CSHL1Q14406 222 aa15.27■□□□□ 0.04
SNX1-213ENST00000561026 SFT2D3Q587I9 215 aa15.27■□□□□ 0.04
SNX1-213ENST00000561026 CATSPEREQ5SY80 951 aa15.27■□□□□ 0.04
SNX1-213ENST00000561026 C1QL3Q5VWW1 255 aa15.27■□□□□ 0.04
SNX1-213ENST00000561026 FCRLBQ6BAA4 426 aa15.27■□□□□ 0.04
SNX1-213ENST00000561026 SBSNQ6UWP8 590 aa15.27■□□□□ 0.04
SNX1-213ENST00000561026 GFRALQ6UXV0 394 aa15.27■□□□□ 0.04
SNX1-213ENST00000561026 KLHL7Q8IXQ5 586 aa15.27■□□□□ 0.04
SNX1-213ENST00000561026 BEST3Q8N1M1 668 aa15.27■□□□□ 0.04
SNX1-213ENST00000561026 TBC1D19Q8N5T2 526 aa15.27■□□□□ 0.04
SNX1-213ENST00000561026 OR5T3Q8NGG3 340 aa15.27■□□□□ 0.04
SNX1-213ENST00000561026 M1APQ8TC57 530 aa15.27■□□□□ 0.04
SNX1-213ENST00000561026 NEIL2Q969S2 332 aa15.27■□□□□ 0.04
SNX1-213ENST00000561026 RELTQ969Z4 430 aa15.27■□□□□ 0.04
SNX1-213ENST00000561026 KCNF1Q9H3M0 494 aa15.27■□□□□ 0.04
SNX1-213ENST00000561026 KCNK13Q9HB14 408 aa15.27■□□□□ 0.04
SNX1-213ENST00000561026 MMP25Q9NPA2 562 aa15.27■□□□□ 0.04
SNX1-213ENST00000561026 IKZF3Q9UKT9 509 aa15.27■□□□□ 0.04
SNX1-213ENST00000561026 CROCCQ5TZA2 2017 aa15.27■□□□□ 0.03
SNX1-213ENST00000561026 MAGEB17A8MXT2 336 aa15.26■□□□□ 0.03
SNX1-213ENST00000561026 DNAJB6O75190 326 aa15.26■□□□□ 0.03
SNX1-213ENST00000561026 ALOX12P18054 663 aa15.26■□□□□ 0.03
SNX1-213ENST00000561026 DR1Q01658 176 aa15.26■□□□□ 0.03
SNX1-213ENST00000561026 ACTN3Q08043 901 aaPredicted RBP15.26■□□□□ 0.03
SNX1-213ENST00000561026 DEFB134Q4QY38 66 aa15.26■□□□□ 0.03
SNX1-213ENST00000561026 NIPAL1Q6NVV3 410 aa15.26■□□□□ 0.03
SNX1-213ENST00000561026 PAPD4Q6PIY7 484 aaKnown RBP15.26■□□□□ 0.03
SNX1-213ENST00000561026 TMEM207Q6UWW9 146 aa15.26■□□□□ 0.03
SNX1-213ENST00000561026 CREG2Q8IUH2 290 aa15.26■□□□□ 0.03
SNX1-213ENST00000561026 NT5CQ8TCD5 201 aa15.26■□□□□ 0.03
SNX1-213ENST00000561026 SLC5A11Q8WWX8 675 aa15.26■□□□□ 0.03
SNX1-213ENST00000561026 TBC1D20Q96BZ9 403 aa15.26■□□□□ 0.03
SNX1-213ENST00000561026 RUNDC3BQ96NL0 473 aa15.26■□□□□ 0.03
SNX1-213ENST00000561026 LPAR4Q99677 370 aa15.26■□□□□ 0.03
SNX1-213ENST00000561026 RBCK1Q9BYM8 510 aa15.26■□□□□ 0.03
SNX1-213ENST00000561026 ZFP69BQ9UJL9 534 aa15.26■□□□□ 0.03
SNX1-213ENST00000561026 PCDHGB6Q9Y5F9 930 aa15.26■□□□□ 0.03
SNX1-213ENST00000561026 PSAT1Q9Y617 370 aa15.26■□□□□ 0.03
SNX1-213ENST00000561026 CHST10O43529 356 aa15.25■□□□□ 0.03
SNX1-213ENST00000561026 UNC5CO95185 931 aa15.25■□□□□ 0.03
SNX1-213ENST00000561026 SERPIND1P05546 499 aa15.25■□□□□ 0.03
SNX1-213ENST00000561026 FHP07954 510 aa15.25■□□□□ 0.03
SNX1-213ENST00000561026 ZNF37AP17032 561 aaPredicted RBP15.25■□□□□ 0.03
SNX1-213ENST00000561026 AHRP35869 848 aa15.25■□□□□ 0.03
SNX1-213ENST00000561026 SCTRP47872 440 aa15.25■□□□□ 0.03
SNX1-213ENST00000561026 ITGA8P53708 1063 aa15.25■□□□□ 0.03
SNX1-213ENST00000561026 ARL4CP56559 192 aa15.25■□□□□ 0.03
SNX1-213ENST00000561026 SKP1P63208 163 aa15.25■□□□□ 0.03
SNX1-213ENST00000561026 SRSF11Q05519 484 aaKnown RBP15.25■□□□□ 0.03
SNX1-213ENST00000561026 RGS1Q08116 209 aa15.25■□□□□ 0.03
SNX1-213ENST00000561026 TUBA3CQ13748 450 aa15.25■□□□□ 0.03
SNX1-213ENST00000561026 MEP1AQ16819 746 aa15.25■□□□□ 0.03
SNX1-213ENST00000561026 PPP1R3AQ16821 1122 aa15.25■□□□□ 0.03
SNX1-213ENST00000561026 ZNF766Q5HY98 468 aa15.25■□□□□ 0.03
SNX1-213ENST00000561026 TUBA3EQ6PEY2 450 aa15.25■□□□□ 0.03
SNX1-213ENST00000561026 CRLF3Q8IUI8 442 aa15.25■□□□□ 0.03
SNX1-213ENST00000561026 SLC34A3Q8N130 599 aa15.25■□□□□ 0.03
SNX1-213ENST00000561026 ANKRD7Q92527 254 aa15.25■□□□□ 0.03
SNX1-213ENST00000561026 TSLPQ969D9 159 aa15.25■□□□□ 0.03
SNX1-213ENST00000561026 CAPZA3Q96KX2 299 aa15.25■□□□□ 0.03
SNX1-213ENST00000561026 TSNARE1Q96NA8 513 aa15.25■□□□□ 0.03
SNX1-213ENST00000561026 NPAS2Q99743 824 aa15.25■□□□□ 0.03
SNX1-213ENST00000561026 SPNS1Q9H2V7 528 aa15.25■□□□□ 0.03
SNX1-213ENST00000561026 SEC14L3Q9UDX4 400 aa15.25■□□□□ 0.03
SNX1-213ENST00000561026 TP73O15350 636 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 SEC31AO94979 1220 aaKnown RBP15.24■□□□□ 0.03
SNX1-213ENST00000561026 B3GALT4O96024 378 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 ZNF888P0CJ79 500 aaPredicted RBP15.24■□□□□ 0.03
SNX1-213ENST00000561026 JAK1P23458 1154 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 CD96P40200 585 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 OR4D2P58180 307 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 OLR1P78380 273 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 MGAT5Q09328 741 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 USP10Q14694 798 aaKnown RBP15.24■□□□□ 0.03
SNX1-213ENST00000561026 MYO7BQ6PIF6 2116 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 ABHD13Q7L211 337 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms