RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 IFNB1P01574 187 aa17.37■□□□□ 0.37
TPM1-226ENST00000560959 NMBRP28336 390 aa17.37■□□□□ 0.37
TPM1-226ENST00000560959 MEOX1P50221 254 aa17.37■□□□□ 0.37
TPM1-226ENST00000560959 KCNJ11Q14654 390 aa17.37■□□□□ 0.37
TPM1-226ENST00000560959 RPS6KA1Q15418 735 aa17.37■□□□□ 0.37
TPM1-226ENST00000560959 CMPK2Q5EBM0 449 aa17.37■□□□□ 0.37
TPM1-226ENST00000560959 THEMIS2Q5TEJ8 643 aa17.37■□□□□ 0.37
TPM1-226ENST00000560959 PEX26Q7Z412 305 aa17.37■□□□□ 0.37
TPM1-226ENST00000560959 PDSS2Q86YH6 399 aa17.37■□□□□ 0.37
TPM1-226ENST00000560959 SULF2Q8IWU5 870 aa17.37■□□□□ 0.37
TPM1-226ENST00000560959 ZFP62Q8NB50 900 aaPredicted RBP17.37■□□□□ 0.37
TPM1-226ENST00000560959 KIFC1Q9BW19 673 aa17.37■□□□□ 0.37
TPM1-226ENST00000560959 PCBD2Q9H0N5 130 aa17.37■□□□□ 0.37
TPM1-226ENST00000560959 EIF2B3Q9NR50 452 aaKnown RBP17.37■□□□□ 0.37
TPM1-226ENST00000560959 BFARQ9NZS9 450 aa17.37■□□□□ 0.37
TPM1-226ENST00000560959 PAK5Q9P286 719 aa17.37■□□□□ 0.37
TPM1-226ENST00000560959 GALPQ9UBC7 116 aa17.37■□□□□ 0.37
TPM1-226ENST00000560959 TSR3Q9UJK0 312 aaKnown RBP17.37■□□□□ 0.37
TPM1-226ENST00000560959 EDARQ9UNE0 448 aa17.37■□□□□ 0.37
TPM1-226ENST00000560959 EPN1Q9Y6I3 576 aaPredicted RBP17.37■□□□□ 0.37
TPM1-226ENST00000560959 HCFC1P51610 2035 aa17.37■□□□□ 0.37
TPM1-226ENST00000560959 INTS1Q8N201 2190 aaKnown RBP17.36■□□□□ 0.37
TPM1-226ENST00000560959 FAM90A27PA6NNH2 459 aa17.36■□□□□ 0.37
TPM1-226ENST00000560959 LIASO43766 372 aa17.36■□□□□ 0.37
TPM1-226ENST00000560959 ZBTB14O43829 449 aa17.36■□□□□ 0.37
TPM1-226ENST00000560959 RDH16O75452 317 aa17.36■□□□□ 0.37
TPM1-226ENST00000560959 VAPBO95292 243 aa17.36■□□□□ 0.37
TPM1-226ENST00000560959 JAK1P23458 1154 aa17.36■□□□□ 0.37
TPM1-226ENST00000560959 ITGA8P53708 1063 aa17.36■□□□□ 0.37
TPM1-226ENST00000560959 HERC3Q15034 1050 aa17.36■□□□□ 0.37
TPM1-226ENST00000560959 TTLL9Q3SXZ7 439 aa17.36■□□□□ 0.37
TPM1-226ENST00000560959 NIPAL1Q6NVV3 410 aa17.36■□□□□ 0.37
TPM1-226ENST00000560959 PAOXQ6QHF9 649 aa17.36■□□□□ 0.37
TPM1-226ENST00000560959 SLC13A3Q8WWT9 602 aa17.36■□□□□ 0.37
TPM1-226ENST00000560959 TSLPQ969D9 159 aa17.36■□□□□ 0.37
TPM1-226ENST00000560959 TBC1D20Q96BZ9 403 aa17.36■□□□□ 0.37
TPM1-226ENST00000560959 PEX11GQ96HA9 241 aa17.36■□□□□ 0.37
TPM1-226ENST00000560959 CCM2LQ9NUG4 571 aaPredicted RBP17.36■□□□□ 0.37
TPM1-226ENST00000560959 VPS9D1Q9Y2B5 631 aa17.36■□□□□ 0.37
TPM1-226ENST00000560959 CRYL1Q9Y2S2 319 aa17.36■□□□□ 0.37
TPM1-226ENST00000560959 NAALAD2Q9Y3Q0 740 aa17.36■□□□□ 0.37
TPM1-226ENST00000560959 A0A1B0GTL3 188 aa17.35■□□□□ 0.37
TPM1-226ENST00000560959 E5RI56 91 aa17.35■□□□□ 0.37
TPM1-226ENST00000560959 PEX1O43933 1283 aa17.35■□□□□ 0.37
TPM1-226ENST00000560959 HS6ST1O60243 411 aa17.35■□□□□ 0.37
TPM1-226ENST00000560959 STATHP02808 62 aa17.35■□□□□ 0.37
TPM1-226ENST00000560959 FHP07954 510 aa17.35■□□□□ 0.37
TPM1-226ENST00000560959 MPC1LP0DKB6 136 aa17.35■□□□□ 0.37
TPM1-226ENST00000560959 ENO3P13929 434 aaPredicted RBP17.35■□□□□ 0.37
TPM1-226ENST00000560959 OGNP20774 298 aaKnown RBP17.35■□□□□ 0.37
TPM1-226ENST00000560959 IMPA1P29218 277 aa17.35■□□□□ 0.37
TPM1-226ENST00000560959 CLCN7P51798 805 aa17.35■□□□□ 0.37
TPM1-226ENST00000560959 SESN2P58004 480 aaPredicted RBP17.35■□□□□ 0.37
TPM1-226ENST00000560959 PMPCAQ10713 525 aa17.35■□□□□ 0.37
TPM1-226ENST00000560959 MYBPHQ13203 477 aa17.35■□□□□ 0.37
TPM1-226ENST00000560959 EMC4Q5J8M3 183 aa17.35■□□□□ 0.37
TPM1-226ENST00000560959 ARMC3Q5W041 872 aa17.35■□□□□ 0.37
TPM1-226ENST00000560959 KIAA0408Q6ZU52 694 aa17.35■□□□□ 0.37
TPM1-226ENST00000560959 ASPGQ86U10 573 aa17.35■□□□□ 0.37
TPM1-226ENST00000560959 SYCE1Q8N0S2 351 aa17.35■□□□□ 0.37
TPM1-226ENST00000560959 KIF2BQ8N4N8 673 aa17.35■□□□□ 0.37
TPM1-226ENST00000560959 AFAP1L2Q8N4X5 818 aa17.35■□□□□ 0.37
TPM1-226ENST00000560959 OTUD6BQ8N6M0 293 aa17.35■□□□□ 0.37
TPM1-226ENST00000560959 KCT2Q8NC54 265 aa17.35■□□□□ 0.37
TPM1-226ENST00000560959 ATG4AQ8WYN0 398 aa17.35■□□□□ 0.37
TPM1-226ENST00000560959 NRGNQ92686 78 aa17.35■□□□□ 0.37
TPM1-226ENST00000560959 FAM136AQ96C01 138 aa17.35■□□□□ 0.37
TPM1-226ENST00000560959 SEC16BQ96JE7 1060 aa17.35■□□□□ 0.37
TPM1-226ENST00000560959 MACROD1Q9BQ69 325 aa17.35■□□□□ 0.37
TPM1-226ENST00000560959 DLL4Q9NR61 685 aa17.35■□□□□ 0.37
TPM1-226ENST00000560959 DNAJB12Q9NXW2 375 aaKnown RBP17.35■□□□□ 0.37
TPM1-226ENST00000560959 ZNF148Q9UQR1 794 aa17.35■□□□□ 0.37
TPM1-226ENST00000560959 FEZF1A0PJY2 475 aa17.34■□□□□ 0.37
TPM1-226ENST00000560959 CDC40O60508 579 aaKnown RBP eCLIP17.34■□□□□ 0.37
TPM1-226ENST00000560959 CTAG2O75638 210 aa17.34■□□□□ 0.37
TPM1-226ENST00000560959 CDC123O75794 336 aaPredicted RBP17.34■□□□□ 0.37
TPM1-226ENST00000560959 IPO7O95373 1038 aaKnown RBP17.34■□□□□ 0.37
TPM1-226ENST00000560959 SYF2O95926 243 aaKnown RBP17.34■□□□□ 0.37
TPM1-226ENST00000560959 SLC35G6P0C7Q6 338 aa17.34■□□□□ 0.37
TPM1-226ENST00000560959 DRD2P14416 443 aa17.34■□□□□ 0.37
TPM1-226ENST00000560959 SKP1P63208 163 aa17.34■□□□□ 0.37
TPM1-226ENST00000560959 CRADDP78560 199 aa17.34■□□□□ 0.37
TPM1-226ENST00000560959 CAPN13Q6MZZ7 669 aaPredicted RBP17.34■□□□□ 0.37
TPM1-226ENST00000560959 C4orf22Q6V702 233 aa17.34■□□□□ 0.37
TPM1-226ENST00000560959 CYHR1Q6ZMK1 362 aa17.34■□□□□ 0.37
TPM1-226ENST00000560959 SLC26A11Q86WA9 606 aa17.34■□□□□ 0.37
TPM1-226ENST00000560959 CCDC71Q8IV32 467 aaPredicted RBP17.34■□□□□ 0.37
TPM1-226ENST00000560959 MFSD3Q96ES6 412 aa17.34■□□□□ 0.37
TPM1-226ENST00000560959 SARGQ9BW04 601 aa17.34■□□□□ 0.37
TPM1-226ENST00000560959 LACRTQ9GZZ8 138 aa17.34■□□□□ 0.37
TPM1-226ENST00000560959 CLK4Q9HAZ1 481 aaKnown RBP17.34■□□□□ 0.37
TPM1-226ENST00000560959 CCDC177Q9NQR7 707 aaPredicted RBP17.34■□□□□ 0.37
TPM1-226ENST00000560959 ABCF3Q9NUQ8 709 aa17.34■□□□□ 0.37
TPM1-226ENST00000560959 ST6GALNAC2Q9UJ37 374 aa17.34■□□□□ 0.37
TPM1-226ENST00000560959 FAM237BA0A1B0GVD1 139 aa17.33■□□□□ 0.36
TPM1-226ENST00000560959 SAGE2PA6NJ88 616 aa17.33■□□□□ 0.36
TPM1-226ENST00000560959 GRK3P35626 688 aa17.33■□□□□ 0.36
TPM1-226ENST00000560959 NUP107P57740 925 aa17.33■□□□□ 0.36
TPM1-226ENST00000560959 QSOX2Q6ZRP7 698 aa17.33■□□□□ 0.36
TPM1-226ENST00000560959 PRELID2Q8N945 189 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms