RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 NT5DC2Q9H857 520 aa14.75□□□□□ -0.05
LYSMD2-204ENST00000560491 IFT80Q9P2H3 777 aaPredicted RBP14.75□□□□□ -0.05
LYSMD2-204ENST00000560491 PLLPQ9Y342 182 aa14.75□□□□□ -0.05
LYSMD2-204ENST00000560491 RNF11Q9Y3C5 154 aa14.75□□□□□ -0.05
LYSMD2-204ENST00000560491 A0A1B0GTL3 188 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 C21orf140B9A014 251 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 C9J4A7 227 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 FFAR3O14843 346 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 GPR42O15529 346 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 CNOT3O75175 753 aaKnown RBP14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 SUPT7LO94864 414 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 B3GALT4O96024 378 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 PCNAP12004 261 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 CPA3P15088 417 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 IL1RNP18510 177 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 HNF4AP41235 474 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 CCNG1P51959 295 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 TMPRSS3P57727 454 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 CXADRP78310 365 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 TRAF3Q13114 568 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 LAPTM5Q13571 262 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 PWP1Q13610 501 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 NCF4Q15080 339 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 RBBP7Q16576 425 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 NDUFA9Q16795 377 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 TNFAIP8L3Q5GJ75 292 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 ARHGAP40Q5TG30 622 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 MED27Q6P2C8 311 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 CROCCP2Q86T23 111 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 EXOC3L1Q86VI1 746 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 SLC22A9Q8IVM8 553 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 SHISA5Q8N114 240 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 RNF175Q8N4F7 328 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 OR9A4Q8NGU2 314 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 RDH11Q8TC12 318 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 TCP10LQ8TDR4 215 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 TRPC4APQ8TEL6 797 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 PPP4R1Q8TF05 950 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 STARD8Q92502 1023 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 ATP6V1E2Q96A05 226 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 L3HYPDHQ96EM0 354 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 MMABQ96EY8 250 aaPredicted RBP14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 SLC6A16Q9GZN6 736 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 PITHD1Q9GZP4 211 aaPredicted RBP14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 KLHL31Q9H511 634 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 ACTL8Q9H568 366 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 ZNF304Q9HCX3 659 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 ARGLU1Q9NWB6 273 aaPredicted RBP14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 SENP1Q9P0U3 644 aa14.74□□□□□ -0.05
LYSMD2-204ENST00000560491 ANKDD1BA6NHY2 528 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 C4orf51C9J302 202 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 TYROBPO43914 113 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 CLDN9O95484 217 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 TBX6O95947 436 aaPredicted RBP14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 MYZAPP0CAP1 466 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 ZNF888P0CJ79 500 aaPredicted RBP14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 IMPDH1P20839 514 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 FBLP22087 321 aaKnown RBP14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 PTPN4P29074 926 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 UCNP55089 124 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 RPS15P62841 145 aaKnown RBP14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 MAT1AQ00266 395 aaKnown RBP14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 CLCQ05315 142 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 FAM53BQ14153 422 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 PCLAFQ15004 111 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 HIST2H2ACQ16777 129 aaPredicted RBP14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 COL28A1Q2UY09 1125 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 TOR1AIP1Q5JTV8 583 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 LIPJQ5W064 366 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 HIST2H2AA3Q6FI13 130 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 PRMT9Q6P2P2 845 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 PDSS2Q86YH6 399 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 C10orf107Q8IVU9 208 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 LAS2Q8IYD9 372 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 TRPV3Q8NET8 790 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 TTLQ8NG68 377 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 OR7G3Q8NG95 312 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 COL26A1Q96A83 441 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 PGM2Q96G03 612 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 SLC45A3Q96JT2 553 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 RHBGQ9H310 441 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 PRM3Q9NNZ6 103 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 CTSFQ9UBX1 484 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 GPN3Q9UHW5 284 aaPredicted RBP14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 KCND3Q9UK17 655 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 FARSAQ9Y285 508 aaKnown RBP14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 PCDHGA6Q9Y5G7 932 aa14.73□□□□□ -0.05
LYSMD2-204ENST00000560491 ZNF860A6NHJ4 632 aa14.72□□□□□ -0.05
LYSMD2-204ENST00000560491 SGK494L7N484 410 aa14.72□□□□□ -0.05
LYSMD2-204ENST00000560491 NKX2-8O15522 239 aa14.72□□□□□ -0.05
LYSMD2-204ENST00000560491 UGDHO60701 494 aa14.72□□□□□ -0.05
LYSMD2-204ENST00000560491 SH3BGRLO75368 114 aa14.72□□□□□ -0.05
LYSMD2-204ENST00000560491 CLEC3AO75596 197 aa14.72□□□□□ -0.05
LYSMD2-204ENST00000560491 ONECUT2O95948 504 aa14.72□□□□□ -0.05
LYSMD2-204ENST00000560491 SERPINA6P08185 405 aa14.72□□□□□ -0.05
LYSMD2-204ENST00000560491 RAB40ALP0C0E4 278 aa14.72□□□□□ -0.05
LYSMD2-204ENST00000560491 PRKAR1AP10644 381 aa14.72□□□□□ -0.05
LYSMD2-204ENST00000560491 GSTM2P28161 218 aa14.72□□□□□ -0.05
LYSMD2-204ENST00000560491 HNRNPH1P31943 449 aaKnown RBP14.72□□□□□ -0.05
LYSMD2-204ENST00000560491 RAB8AP61006 207 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms