RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 SORCS1Q8WY21 1168 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 TBX5Q99593 518 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 RBCK1Q9BYM8 510 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 MARCH7Q9H992 704 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 OR6C74A6NCV1 312 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 CDC123O75794 336 aaPredicted RBP13.04□□□□□ -0.32
TRAF3-208ENST00000560371 CDK6Q00534 326 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 C1orf61Q13536 156 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 IRF5Q13568 498 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 IQCCQ4KMZ1 466 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 ANKFN1Q8N957 763 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 TLCD1Q96CP7 247 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 TSGA13Q96PP4 275 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 LGR4Q9BXB1 951 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 WDR6Q9NNW5 1121 aaKnown RBP13.04□□□□□ -0.32
TRAF3-208ENST00000560371 ZDHHC2Q9UIJ5 367 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 POMPQ9Y244 141 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 RCBTB2O95199 551 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 CCNOP22674 350 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 RPS6KA3P51812 740 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 ZNF763Q0D2J5 394 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 KCNC3Q14003 757 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 CST6Q15828 149 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 PDCD4Q53EL6 469 aaKnown RBP13.04□□□□□ -0.32
TRAF3-208ENST00000560371 CRTC2Q53ET0 693 aaPredicted RBP13.04□□□□□ -0.32
TRAF3-208ENST00000560371 EBF4Q9BQW3 602 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 WBP11Q9Y2W2 641 aaKnown RBP13.04□□□□□ -0.32
TRAF3-208ENST00000560371 RNF11Q9Y3C5 154 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 TRMUO75648 421 aaKnown RBP13.04□□□□□ -0.32
TRAF3-208ENST00000560371 C5AR1P21730 350 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 MTTPP55157 894 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 CBX3Q13185 183 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 SLC35G1Q2M3R5 365 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 ADNP2Q6IQ32 1131 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 TRAM1L1Q8N609 369 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 OR10G2Q8NGC3 310 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 PTCHD1Q96NR3 888 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 TMLHEQ9NVH6 421 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 H3BNX3 289 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 MUSKO15146 869 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 MID1O15344 667 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 ZMYND11Q15326 602 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 FAM182AQ5T1J6 154 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 PHF12Q96QT6 1004 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 CMKLR1Q99788 373 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 ACTL8Q9H568 366 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 GGT5P36269 586 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 ST3GAL3Q11203 375 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 BNIP1Q12981 228 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 RTP2Q5QGT7 225 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 ZDHHC24Q6UX98 284 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 POLR2J2Q9GZM3 115 aaKnown RBP13.03□□□□□ -0.32
TRAF3-208ENST00000560371 HSD3B7Q9H2F3 369 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 ZNF879B4DU55 563 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 AIREO43918 545 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 NOS1APO75052 506 aaPredicted RBP13.03□□□□□ -0.32
TRAF3-208ENST00000560371 ID2Q02363 134 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 ZNF267Q14586 743 aaPredicted RBP13.03□□□□□ -0.32
TRAF3-208ENST00000560371 C1orf216Q8TAB5 229 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 SGCDQ92629 289 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 SH3YL1Q96HL8 342 aaPredicted RBP13.03□□□□□ -0.32
TRAF3-208ENST00000560371 CGREF1Q99674 301 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 PCDHAC1Q9H158 963 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 PRTFDC1Q9NRG1 225 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 UNC13CQ8NB66 2214 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 BLOC1S5-TXNDC5H3BN57 136 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 DLX3O60479 287 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 ZNF217O75362 1048 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 CTSAP10619 480 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 ALG1LQ6GMV1 187 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 C2CD4AQ8NCU7 369 aaPredicted RBP13.03□□□□□ -0.32
TRAF3-208ENST00000560371 PLEKHO2Q8TD55 490 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 FAM120CQ9NX05 1096 aaKnown RBP13.03□□□□□ -0.32
TRAF3-208ENST00000560371 LYARQ9NX58 379 aaKnown RBP13.03□□□□□ -0.32
TRAF3-208ENST00000560371 SLCO3A1Q9UIG8 710 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 PCDHGB1Q9Y5G3 927 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 CCDC88CQ9P219 2028 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 AHSA1O95433 338 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 KCNC1P48547 511 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 PON2Q15165 354 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 KIAA1161Q6NSJ0 714 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 OR5K1Q8NHB7 308 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 PIK3R3Q92569 461 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 KCNC2Q96PR1 638 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 RPL36Q9Y3U8 105 aaKnown RBP13.03□□□□□ -0.32
TRAF3-208ENST00000560371 NPC1O15118 1278 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 RPS15P62841 145 aaKnown RBP13.03□□□□□ -0.32
TRAF3-208ENST00000560371 ADAD1Q96M93 576 aaKnown RBP13.03□□□□□ -0.32
TRAF3-208ENST00000560371 ZNF860A6NHJ4 632 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 ITM2AO43736 263 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 OPN1SWP03999 348 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 CYBAP13498 195 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 DNAJA1P31689 397 aaKnown RBP13.03□□□□□ -0.32
TRAF3-208ENST00000560371 SMSP52788 366 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 SOX4Q06945 474 aaPredicted RBP13.03□□□□□ -0.32
TRAF3-208ENST00000560371 RAB33AQ14088 237 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 LINC00471Q8N535 108 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 FAM186AA6NE01 2351 aa13.03□□□□□ -0.32
TRAF3-208ENST00000560371 PRSS51A0A1B0GVH4 220 aa13.02□□□□□ -0.32
TRAF3-208ENST00000560371 H3BQ06 376 aaPredicted RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms