RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 SLC6A16Q9GZN6 736 aa11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 P2RY12Q9H244 342 aa11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 PNPLA3Q9NST1 481 aa11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 UTP6Q9NYH9 597 aaKnown RBP11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 CRIM1Q9NZV1 1036 aa11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 Q9UFV3 132 aa11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 CHD3Q12873 2000 aaKnown RBP11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 KIAA1549Q9HCM3 1950 aa11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 A6NNC1 897 aa11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 NPIPA2E9PIF3 369 aa11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 NPIPA3F8WFD2 350 aa11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 CDC123O75794 336 aaPredicted RBP11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 ATE1O95260 518 aa11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 GLI4P10075 376 aa11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 CTNNA1P35221 906 aaKnown RBP11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 KIR2DL3P43628 341 aa11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 ZFP36L2P47974 494 aaKnown RBP11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 OR4D2P58180 307 aa11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 ACVR1Q04771 509 aa11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 TSTA3Q13630 321 aaPredicted RBP11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 GXYLT1Q4G148 440 aa11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 FASTKD1Q53R41 847 aaKnown RBP11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 TSTD2Q5T7W7 516 aa11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 AADACL2Q6P093 401 aa11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 OTOAQ7RTW8 1153 aa11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 VN1R4Q7Z5H5 301 aa11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 OR52K1Q8NGK4 314 aa11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 OR6P1Q8NGX9 317 aa11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 MCOLN3Q8TDD5 553 aa11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 CCDC138Q96M89 665 aa11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 PANX3Q96QZ0 392 aa11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 MACROD1Q9BQ69 325 aa11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 TTYH2Q9BSA4 534 aa11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 RBCK1Q9BYM8 510 aa11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 DEFB127Q9H1M4 99 aa11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 LANCL2Q9NS86 450 aa11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 MARCH4Q9P2E8 410 aaPredicted RBP11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 TSR3Q9UJK0 312 aaKnown RBP11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 RIMKLBQ9ULI2 386 aa11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 FAM215AQ9Y5M1 114 aa11.98□□□□□ -0.49
RABGGTA-213ENST00000560127 MAGEB17A8MXT2 336 aa11.97□□□□□ -0.49
RABGGTA-213ENST00000560127 MYO1CO00159 1063 aa11.97□□□□□ -0.49
RABGGTA-213ENST00000560127 RDH16O75452 317 aa11.97□□□□□ -0.49
RABGGTA-213ENST00000560127 CCNDBP1O95273 360 aa11.97□□□□□ -0.49
RABGGTA-213ENST00000560127 RAF1P04049 648 aa11.97□□□□□ -0.49
RABGGTA-213ENST00000560127 ACVR2AP27037 513 aa11.97□□□□□ -0.49
RABGGTA-213ENST00000560127 PPARGP37231 505 aaPredicted RBP11.97□□□□□ -0.49
RABGGTA-213ENST00000560127 ADH7P40394 386 aa11.97□□□□□ -0.49
RABGGTA-213ENST00000560127 GPR85P60893 370 aa11.97□□□□□ -0.49
RABGGTA-213ENST00000560127 COPS2P61201 443 aa11.97□□□□□ -0.49
RABGGTA-213ENST00000560127 MPP1Q00013 466 aa11.97□□□□□ -0.49
RABGGTA-213ENST00000560127 ANKRD20A4Q4UJ75 823 aa11.97□□□□□ -0.49
RABGGTA-213ENST00000560127 RTL6Q6ICC9 239 aa11.97□□□□□ -0.49
RABGGTA-213ENST00000560127 TMEM214Q6NUQ4 689 aaKnown RBP11.97□□□□□ -0.49
RABGGTA-213ENST00000560127 MDGA2Q7Z553 956 aa11.97□□□□□ -0.49
RABGGTA-213ENST00000560127 ADCK2Q7Z695 626 aa11.97□□□□□ -0.49
RABGGTA-213ENST00000560127 PDSS2Q86YH6 399 aa11.97□□□□□ -0.49
RABGGTA-213ENST00000560127 LRRC8AQ8IWT6 810 aa11.97□□□□□ -0.49
RABGGTA-213ENST00000560127 FAM71DQ8N9W8 422 aa11.97□□□□□ -0.49
RABGGTA-213ENST00000560127 PPFIBP2Q8ND30 876 aa11.97□□□□□ -0.49
RABGGTA-213ENST00000560127 OR5M9Q8NGP3 310 aa11.97□□□□□ -0.49
RABGGTA-213ENST00000560127 PEX11GQ96HA9 241 aa11.97□□□□□ -0.49
RABGGTA-213ENST00000560127 OSBPL8Q9BZF1 889 aa11.97□□□□□ -0.49
RABGGTA-213ENST00000560127 KCNF1Q9H3M0 494 aa11.97□□□□□ -0.49
RABGGTA-213ENST00000560127 DMRT3Q9NQL9 472 aa11.97□□□□□ -0.49
RABGGTA-213ENST00000560127 PACSIN2Q9UNF0 486 aaPredicted RBP11.97□□□□□ -0.49
RABGGTA-213ENST00000560127 EFR3BQ9Y2G0 817 aa11.97□□□□□ -0.49
RABGGTA-213ENST00000560127 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.97□□□□□ -0.49
RABGGTA-213ENST00000560127 DOCK7Q96N67 2140 aa11.96□□□□□ -0.49
RABGGTA-213ENST00000560127 ROS1P08922 2347 aa11.96□□□□□ -0.49
RABGGTA-213ENST00000560127 FEZF1A0PJY2 475 aa11.96□□□□□ -0.49
RABGGTA-213ENST00000560127 H7BY64 318 aa11.96□□□□□ -0.49
RABGGTA-213ENST00000560127 KPNA5O15131 536 aa11.96□□□□□ -0.49
RABGGTA-213ENST00000560127 PSMD3O43242 534 aa11.96□□□□□ -0.49
RABGGTA-213ENST00000560127 LY6G6DO95868 133 aa11.96□□□□□ -0.49
RABGGTA-213ENST00000560127 PNLIPRP1P54315 467 aa11.96□□□□□ -0.49
RABGGTA-213ENST00000560127 PRAMEP78395 509 aa11.96□□□□□ -0.49
RABGGTA-213ENST00000560127 GBX1Q14549 363 aa11.96□□□□□ -0.49
RABGGTA-213ENST00000560127 ARHGAP19Q14CB8 494 aa11.96□□□□□ -0.49
RABGGTA-213ENST00000560127 SLC25A35Q3KQZ1 300 aa11.96□□□□□ -0.49
RABGGTA-213ENST00000560127 B3GNT6Q6ZMB0 384 aa11.96□□□□□ -0.49
RABGGTA-213ENST00000560127 CHSY3Q70JA7 882 aa11.96□□□□□ -0.49
RABGGTA-213ENST00000560127 KIAA1328Q86T90 577 aa11.96□□□□□ -0.49
RABGGTA-213ENST00000560127 ARMC10Q8N2F6 343 aa11.96□□□□□ -0.49
RABGGTA-213ENST00000560127 ZCCHC10Q8TBK6 192 aa11.96□□□□□ -0.49
RABGGTA-213ENST00000560127 PRAP1Q96NZ9 151 aa11.96□□□□□ -0.49
RABGGTA-213ENST00000560127 PKP4Q99569 1192 aa11.96□□□□□ -0.49
RABGGTA-213ENST00000560127 DEPPQ9NTK1 212 aa11.96□□□□□ -0.49
RABGGTA-213ENST00000560127 CATSPERZQ9NTU4 200 aa11.96□□□□□ -0.49
RABGGTA-213ENST00000560127 CBLCQ9ULV8 474 aa11.96□□□□□ -0.49
RABGGTA-213ENST00000560127 PCDHA3Q9Y5H8 950 aa11.96□□□□□ -0.49
RABGGTA-213ENST00000560127 PINLYPA6NC86 204 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 E7ENX8 843 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 FCHO1O14526 889 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 KIF5CO60282 957 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 SLC16A8O95907 504 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 FTCDO95954 541 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 RPS3P23396 243 aaKnown RBP eCLIP11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 ADRA1DP25100 572 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 PCSK6P29122 969 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms