RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 OR7G1Q8NGA0 311 aa13.46□□□□□ -0.26
CSPG4P12-202ENST00000559989 OR2T29Q8NH02 315 aa13.46□□□□□ -0.26
CSPG4P12-202ENST00000559989 TRAPPC12Q8WVT3 735 aa13.46□□□□□ -0.26
CSPG4P12-202ENST00000559989 DDX1Q92499 740 aaKnown RBP13.46□□□□□ -0.26
CSPG4P12-202ENST00000559989 GCDHQ92947 438 aaPredicted RBP13.46□□□□□ -0.26
CSPG4P12-202ENST00000559989 PLCXD1Q9NUJ7 323 aa13.46□□□□□ -0.26
CSPG4P12-202ENST00000559989 TMEM9Q9P0T7 183 aa13.46□□□□□ -0.26
CSPG4P12-202ENST00000559989 CPA4Q9UI42 421 aa13.46□□□□□ -0.26
CSPG4P12-202ENST00000559989 THBS3P49746 956 aa13.46□□□□□ -0.26
CSPG4P12-202ENST00000559989 OTOP1Q7RTM1 612 aa13.46□□□□□ -0.26
CSPG4P12-202ENST00000559989 SH3RF1Q7Z6J0 888 aa13.46□□□□□ -0.26
CSPG4P12-202ENST00000559989 MITD1Q8WV92 249 aa13.46□□□□□ -0.26
CSPG4P12-202ENST00000559989 ZNF419Q96HQ0 510 aaPredicted RBP13.46□□□□□ -0.26
CSPG4P12-202ENST00000559989 PYURFQ96I23 114 aa13.46□□□□□ -0.26
CSPG4P12-202ENST00000559989 SYT3Q9BQG1 590 aa13.46□□□□□ -0.26
CSPG4P12-202ENST00000559989 FN3KRPQ9HA64 309 aa13.46□□□□□ -0.26
CSPG4P12-202ENST00000559989 FAM86C1Q9NVL1 165 aa13.46□□□□□ -0.26
CSPG4P12-202ENST00000559989 WDR45Q9Y484 360 aa13.46□□□□□ -0.26
CSPG4P12-202ENST00000559989 ATG4BQ9Y4P1 393 aa13.46□□□□□ -0.26
CSPG4P12-202ENST00000559989 A0A1B0GV50 99 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 OR6C74A6NCV1 312 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 PEX12O00623 359 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 C1RP00736 705 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 KCNC1P48547 511 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 PLA2G16P53816 162 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 TLE1Q04724 770 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 EGFL6Q8IUX8 553 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 NSMAFQ92636 917 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 FOLH1BQ9HBA9 442 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 TRBV23OR9-2A0A075B6M9 112 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 DNM1LO00429 736 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 MAGEB1P43366 347 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 FASLGP48023 281 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 NR0B1P51843 470 aaKnown RBP13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 TARBP2Q15633 366 aaKnown RBP13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 ZNF367Q7RTV3 350 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 TRAPPC6BQ86SZ2 158 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 RCBTB1Q8NDN9 531 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 C3orf49Q96BT1 292 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 OR51I1Q9H343 314 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 GPATCH2Q9NW75 528 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 SPHKAPQ2M3C7 1700 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 NPHP4O75161 1426 aaPredicted RBP13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 AQP12BA6NM10 295 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 AP2A1O95782 977 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 DLDP09622 509 aaKnown RBP13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 PRPH2P23942 346 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 OAZ1P54368 228 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 MPP7Q5T2T1 576 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 AQP12AQ8IXF9 295 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 ZNF781Q8N8C0 355 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 GLYATL1Q969I3 302 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 DPCDQ9BVM2 203 aaPredicted RBP13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 SMCO4Q9NRQ5 59 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 TAS2R8Q9NYW2 309 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 CNTN3Q9P232 1028 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 EXTL2Q9UBQ6 330 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 SRRDQ9UH36 339 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 TMEM205Q6UW68 189 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 SLC9A9Q8IVB4 645 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 TRMT10AQ8TBZ6 339 aaKnown RBP13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 ZDHHC1Q8WTX9 485 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 HOXB13Q92826 284 aaPredicted RBP13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 MMP27Q9H306 513 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 SLA2Q9H6Q3 261 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 BLOC1S5-TXNDC5H3BN57 136 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 CD34P28906 385 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 NSG1P42857 185 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 NADK2Q4G0N4 442 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 NT5DC1Q5TFE4 455 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 ZNF641Q96N77 438 aaPredicted RBP13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 CYP2S1Q96SQ9 504 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 TIGARQ9NQ88 270 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 CD84Q9UIB8 345 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 MYH15Q9Y2K3 1946 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 EEF1E1O43324 174 aaKnown RBP13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 OR4F21O95013 312 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 ADORA2AP29274 412 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 SPOCK1Q08629 439 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 GET4Q7L5D6 327 aaPredicted RBP13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 CARM1Q86X55 608 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 SAMD12Q8N8I0 201 aa13.45□□□□□ -0.26
CSPG4P12-202ENST00000559989 MAP2P11137 1827 aaKnown RBP13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 ANKRD12Q6UB98 2062 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 ANKRD28O15084 1053 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 CXCL14O95715 111 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 OXSR1O95747 527 aaPredicted RBP13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 TMEM220Q6QAJ8 160 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 KDELC1Q6UW63 502 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 SERPINA9Q86WD7 417 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 RASGEF1CQ8N431 466 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 PSD4Q8NDX1 1056 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 TSPAN10Q9H1Z9 355 aaPredicted RBP13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 MANSC4A6NHS7 340 aaPredicted RBP13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 NPIPA2E9PIF3 369 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 NPIPA3F8WFD2 350 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 SAP18O00422 153 aaKnown RBP13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 ENGP17813 658 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 PRKCIP41743 596 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 TOB1P50616 345 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms